PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc05027.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26035.1 Da PI: 6.5167 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.5 | 2.4e-16 | 43 | 93 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr +k +g+Wv+eIr p++ r r++lg+++ +e+Aa+a +aa +l+g Zmw_sc05027.1.g00040.1.am.mk 43 KKYKGVRLRK-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAFVCLRG 93 59******99.**********933...5*********************999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 8.33E-25 | 43 | 106 | No hit | No description |
PROSITE profile | PS51032 | 20.916 | 44 | 104 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-18 | 44 | 106 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.3E-28 | 44 | 110 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.6E-9 | 44 | 92 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.4E-26 | 44 | 106 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.8E-8 | 45 | 56 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.8E-8 | 67 | 83 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MRRRRPTRHS RVESPVNAPH APAETSISGM SSSPEMEGGR ESKKYKGVRL RKWGKWVSEI 60 RLPNSRERIW LGSYDAPEKA ARAFDAAFVC LRGSGAAGAD LNFPDSPPPC RASCSIDPQE 120 VQAAALSHAN RAAVTAREAA AALMDVDDSP PAATLSREAL AHGAGFLDAG RGIEVVAPVR 180 ADGSIDWRPV MAHPPPLYSP IGWGSNAYDF LQMPPAAEAA DEDMEETIHG ASASLWSFDS 240 RY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025794487.1 | 1e-104 | ethylene-responsive transcription factor ERF017-like | ||||
TrEMBL | A0A3G2LN09 | 1e-172 | A0A3G2LN09_9POAL; ERF transcription factor | ||||
STRING | Pavir.J00593.1.p | 1e-102 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP861 | 32 | 144 |