PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc04942.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 26883.2 Da PI: 8.745 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.7 | 7.4e-30 | 11 | 153 | 1 | 119 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk................kvka....eekewyf 60 lppGfrF+Ptdeel+v+yL++++ +++l+++ i++++i+ ++P+dL p + +e e yf Zmw_sc04942.1.g00020.1.sm.mk 11 LPPGFRFRPTDEELIVHYLRRRAFASPLPAAVDIPDIRILAHDPSDLlPPgelseaslaerslqaaH--RrggwNEPERYF 89 79***************************9666**************63246899999888765431..1333355588** PP NAM 61 FskrdkkyatgkrknratksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgekt 119 F++++ ky +g+r+nrat +gyWkatgk+k+v ++ + lvg+k++ +++a +++++ Zmw_sc04942.1.g00020.1.sm.mk 90 FTCKEAKYVKGRRANRATGAGYWKATGKEKPVAVAapggnQAVLVGMKRSXXXRRAQAGEASRA 153 ********************************9988876555569**99988876666555544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.14E-31 | 8 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.751 | 11 | 189 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.7E-16 | 12 | 158 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MDAKEVVRRR LPPGFRFRPT DEELIVHYLR RRAFASPLPA AVDIPDIRIL AHDPSDLLPP 60 GELSEASLAE RSLQAAHRRG GWNEPERYFF TCKEAKYVKG RRANRATGAG YWKATGKEKP 120 VAVAAPGGNQ AVLVGMKRSX XXRRAQAGEA SRADEGWVLC RVFRKRGSSA SDGTAPAEAD 180 ADAERGAEEE GEGDDAAPAS GFIDFFARAD RQRRRRASSP VVTVSSSCLT DASHECRDQD 240 TTSGGCA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-21 | 11 | 167 | 15 | 170 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 209 | 215 | DRQRRRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025809222.1 | 3e-76 | NAC domain-containing protein 83 | ||||
TrEMBL | A0A3L6RAA2 | 4e-84 | A0A3L6RAA2_PANMI; NAC domain-containing protein 83 | ||||
STRING | Pavir.Cb00769.1.p | 2e-75 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6317 | 32 | 54 |