PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03404.1.g00090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 265aa MW: 29466.8 Da PI: 6.0387 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 26.9 | 1e-08 | 123 | 174 | 17 | 59 |
T-SS-EEEEEE-ST...T---EEEEEE-SSSTT......EEEEEEES--SS- CS WRKY 17 gsefprsYYrCtsa...gCpvkkkversaedpk......vveitYegeHnhe 59 + + rsYYrCt++ gC+++k v++++e + + +++Y+g+H+++ Zmw_sc03404.1.g00090.1.sm.mk 123 KHNSRRSYYRCTYKqeqGCKATKTVQQQDEGTGadhaavMYTVVYHGQHTCK 174 56778********98999********99854322222227799*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.7E-10 | 119 | 175 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.1E-8 | 119 | 175 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.93E-9 | 120 | 175 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.1E-12 | 120 | 174 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence Send to blast |
MKRHHHPNNN SKMSLISGQP PACYSPSRTV CDHGSAMKEI AKEQSLVTQL RAIVLPALQA 60 DKRSELVAQM FQDVLDCSSK AMAELQLLRD KSDDDALLFD DKKRVRRIPN EVDKEDVIKP 120 HQKHNSRRSY YRCTYKQEQG CKATKTVQQQ DEGTGADHAA VMYTVVYHGQ HTCKQGNSCS 180 DSGADGFEAK IAVPSGSDDS RSSISKNCLE CPCDQQSSRD GSNKLINESA DLNAENNMYE 240 AFDMTASAFL ELDSWDLDAL LRSDA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025805419.1 | 2e-71 | probable WRKY transcription factor 62 | ||||
TrEMBL | K3ZN09 | 7e-71 | K3ZN09_SETIT; Uncharacterized protein | ||||
STRING | Pavir.Cb02194.1.p | 2e-72 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3258 | 30 | 79 |