PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03263.1.g00150.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CAMTA
Protein Properties Length: 1207aa    MW: 134338 Da    PI: 5.9986
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03263.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.61.8e-56211372118
                            CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvev 80 
                                     ++ ++rwl++ ei++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+v
  Zmw_sc03263.1.g00150.1.sm.mkhc  21 VEAQNRWLRPAEICQILSNYKKFSIAPEPPNRPPSGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDV 99 
                                     6679*************************************************************************** PP

                            CG-1  81 lycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                                     l+cyYah+e+n++fqrr+ywlLee + +ivlvhylevk
  Zmw_sc03263.1.g00150.1.sm.mkhc 100 LHCYYAHGEDNANFQRRTYWLLEEGFMNIVLVHYLEVK 137
                                     ***********************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.10316142IPR005559CG-1 DNA-binding domain
SMARTSM010766.8E-7819137IPR005559CG-1 DNA-binding domain
PfamPF038592.3E-5022136IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.103.7E-5444531IPR013783Immunoglobulin-like fold
PfamPF018338.0E-5445518IPR002909IPT domain
SuperFamilySSF812969.8E-16445531IPR014756Immunoglobulin E-set
SuperFamilySSF484039.33E-17621736IPR020683Ankyrin repeat-containing domain
CDDcd002043.04E-13622734No hitNo description
Gene3DG3DSA:1.25.40.202.8E-17628737IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.918642736IPR020683Ankyrin repeat-containing domain
PfamPF127963.9E-7648737IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.19675707IPR002110Ankyrin repeat
SMARTSM002480.14675707IPR002110Ankyrin repeat
SMARTSM00248460714743IPR002110Ankyrin repeat
SMARTSM000150.094849871IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525409.56E-8850900IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500968.846850879IPR000048IQ motif, EF-hand binding site
PfamPF006120.0066851870IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0063872894IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.359873897IPR000048IQ motif, EF-hand binding site
PfamPF006123.1E-4875894IPR000048IQ motif, EF-hand binding site
PfamPF039663.2E-1410791196IPR005651Uncharacterised protein family UPF0434/Trm112
Gene3DG3DSA:2.20.25.102.6E-711721204No hitNo description
SuperFamilySSF1589974.05E-611731206No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1207 aa     Download sequence    Send to blast
MAEMRNYSVS NQPPDIPQIL VEAQNRWLRP AEICQILSNY KKFSIAPEPP NRPPSGSLFL  60
FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEDN ANFQRRTYWL  120
LEEGFMNIVL VHYLEVKGGK ESFSCTKEAE EIAGLSSADS PACSNSFASQ SQVASQTMDA  180
ESPISGQILE YEDAETDNCR ASSRYNPFTE MQQPLDANVM DPFLGASVPN TSPNNLGYFG  240
QMQPTTANLN NHFVTHDAMS SMFNESGSGL RNDPKTPLDS VRFGETFPEY ASGFTEPRIY  300
SSVATTESNN LDDNSYLQTY VSEALYTNNL TKKEADALSA AGITPSQAEN DSYTDRSIRY  360
PLLKQSSLDL FNMEPDGLKK FDSFSRWMSS ELAEVVDLSV KSSSDAFWST TETENVADGN  420
NIPINEQLDA FVVSPSLSQD QLFSIIDVSP SWAYTGSKTK VLITGTFLAN KEDVEKCRWS  480
CMFGDVEVPA EVLVDGSLRS YTPVHHSGRV PFYVTCSNRV ACSEVREFEF RDSEARYMET  540
SDPQTTGVNE MHLHIRLEKL LSLGPDDYEK YVLSSGNKSE LIDTINALML DDKFSNMALP  600
SDEKISTVRD QNFEKLMKEK LYYWLIHKIH DDGKGPNVLG KEGQGVIHLV AALGYDWAIR  660
PIVAAGVNVN FRDIRGWTAL HWAASCGRER TVGALIANGA ASGALTDPTP QFPSGRTAAD  720
LASENGHKGI AGFLAESALT SHLSALTLKE SQVDNVEEIC GSAASDDFME SSSAQLACAD  780
SQAESLKDSL TAVRKSTQAA ARIFQAFRVE SFHRKKVIEY GDDDCGLSDE RTLSLVSLKH  840
AKPGQGDVPL HSAAVRIQNK FRGWKGRKEF MLIRQKIVKI QAHVRGHQVR KSFRKIVWSV  900
GIVEKVILRW RRKRRGLRGF QAEKQLEGPS QSQIQPAGVE DEYDFLKDGR KQAEGRLQRA  960
LARVHSMTQY PEARDQYRRL QTCVTKLQES KEMEDRMLSG SAGADGASAH VTFAASGREH  1020
EEAQNAGTTH LSGSPKPSPS SARVFLRSRS TPPEQRGHPL TPTREEQPQL EIGKVEMRLL  1080
THNMLASNVR GVTTGYPLKL EATNWCTKEV ELNADFIKGL LPKIDWRALV AATRALDLPE  1140
LLPEEQPPVE EIFAEGAADV EGSAIRRIHH ALLEIHVQQG ALVCPESGRT FPIEKGIPNM  1200
MLHEDEI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ped_B3e-271077120619140Multifunctional methyltransferase subunit TRM112-like protein
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025800735.10.0calmodulin-binding transcription activator 3-like
TrEMBLA0A2T7EYS20.0A0A2T7EYS2_9POAL; Uncharacterized protein
STRINGPavir.Ba00386.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140