PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03211.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 381aa MW: 40955.2 Da PI: 5.4174 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.7 | 3.7e-11 | 182 | 240 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l +l+ + l+se+ Zmw_sc03211.1.g00020.1.sm.mkhc 182 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLTTQLAMLQRDTSGLTSEN 240 9************************************************9999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-17 | 178 | 242 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.151 | 180 | 243 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-9 | 182 | 240 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-11 | 182 | 238 | No hit | No description |
SuperFamily | SSF57959 | 5.06E-11 | 182 | 233 | No hit | No description |
CDD | cd14703 | 1.31E-22 | 183 | 232 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence Send to blast |
MDETPTVDPA ASASTSTSAA GETAASRDVA AMLPNSPPRR GAGHRRAQSE ILLGGALPDD 60 LTFDADLGVV GEAGRDEYEE DDDEDEEECP GGSGAGSSSR MFEMFLENNG GLAEPTEPSP 120 HQHQQVSPAA PPARPRHQHS MSMDGSTSLG STSAGMAGRS GADAKKAISD AKLAELALVD 180 PKRAKRILAN RQSAARSKER KMRYIAELER KVQTLQTEAT TLTTQLAMLQ RDTSGLTSEN 240 SDLKMRVQSM EQQVRLQDAL NDRLRDEIQQ LKIATGQVNT NIGKMGNFGL SSYGGNLQSY 300 QRTQIQSLLA AQQLQQLQIH SQSQHQQQQT HLQQHLSTAQ QHQLLQEALP FPGDLKMKGL 360 ATTSLSQNAG ASDGHAVNSE P |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001353704.1 | 1e-164 | uncharacterized protein LOC100382174 | ||||
Swissprot | Q04088 | 2e-83 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | C0PDU9 | 1e-163 | C0PDU9_MAIZE; BZIP transcription factor | ||||
STRING | GRMZM2G112483_P01 | 1e-163 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Publications ? help Back to Top | |||
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