PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03157.1.g00140.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 465aa MW: 51057.2 Da PI: 9.1724

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03157.1.g00140.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	29.1	2e-09	445	465	1	21
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK+vk+s +p Zmw_sc03157.1.g00140.1.am.mk 445 LDDGYKWRKYGQKVVKNSLHP 465 59***************9887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	4.5E-11	430	465	IPR003657	WRKY domain
SuperFamily	SSF118290	4.45E-8	437	465	IPR003657	WRKY domain
PROSITE profile	PS50811	12.656	440	465	IPR003657	WRKY domain
Pfam	PF03106	1.3E-5	446	465	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence Send to blast
MEADDEFGVC SAVRIALGYM RWPVGDLKKK GRLLQRARND RNSPLQQNRG LIWKHQCVCL 60 QQQVTAAIFQ QVEFHFHFTF RVQTSESIGI NPLLSASLHA TRDSAIPDWR ATPPPQREGS 120 LHGGHHEESP SLPRYGRMCP QVSASVRKLA IDPFLCRFDI KRLSIGDVQN LEWEALEAKI 180 RHWLCSAYAI GGCTRAARWK AKPAPIHPSR NTYQDGNDSR IDWLPTAGEA IDSRALDSES 240 HSPPPLTLGA SSSTSSQLTP KGKEGSIPPT NSQLLPQEPL CARSINRFGA KMQAYMEGGQ 300 LGTCLPASLV LPDSYAFSFP SPPLQLPTLP KRLLQMPFDQ GEAGNHGAML ASDLGGLHQL 360 PALPFGCSGA AAVVSGGKPT AGLMPSVEEV CTSVTKVGYE GATCNGSSTW WKSSATMADR 420 GKMKVRRKMR EPRFCFQTKS DVDVLDDGYK WRKYGQKVVK NSLHP

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence Send to blast

MEADDEFGVC SAVRIALGYM RWPVGDLKKK GRLLQRARND RNSPLQQNRG LIWKHQCVCL  60
QQQVTAAIFQ QVEFHFHFTF RVQTSESIGI NPLLSASLHA TRDSAIPDWR ATPPPQREGS  120
LHGGHHEESP SLPRYGRMCP QVSASVRKLA IDPFLCRFDI KRLSIGDVQN LEWEALEAKI  180
RHWLCSAYAI GGCTRAARWK AKPAPIHPSR NTYQDGNDSR IDWLPTAGEA IDSRALDSES  240
HSPPPLTLGA SSSTSSQLTP KGKEGSIPPT NSQLLPQEPL CARSINRFGA KMQAYMEGGQ  300
LGTCLPASLV LPDSYAFSFP SPPLQLPTLP KRLLQMPFDQ GEAGNHGAML ASDLGGLHQL  360
PALPFGCSGA AAVVSGGKPT AGLMPSVEEV CTSVTKVGYE GATCNGSSTW WKSSATMADR  420
GKMKVRRKMR EPRFCFQTKS DVDVLDDGYK WRKYGQKVVK NSLHP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1138	38	130