PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc02708.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 484aa MW: 51146.9 Da PI: 6.5304 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.3 | 3.9e-14 | 178 | 238 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ +r+ r+++NRe+A+ sRqRKk ++eeLeekvk++ + +L ++++ e a+l+++ Zmw_sc02708.1.g00120.1.sm.mkhc 178 EDPRRAARLMRNRESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRISFVMAENATLRQQ 238 66789***********************************99******9999999999886 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.7E-16 | 177 | 241 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.933 | 179 | 239 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.0E-12 | 180 | 238 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.69E-12 | 181 | 239 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-15 | 181 | 239 | No hit | No description |
CDD | cd14704 | 1.80E-19 | 182 | 233 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 484 aa Download sequence Send to blast |
MAEPALLDPS AFDLRHYPAH LFDPDLPMAG GGLPLGEFAG DGDCDGFDFD LPADFSVDDF 60 LLRSPDRGDD DDNSGEGSAA GSGPAPSSAA SPSTSAANSA VAHGEREVKH EDSDEGRSGG 120 DAPASWSLKR KQASPELSTD GAKCRRSGDG ELSPSASASA SRAAAEGSDE RGTAGEEEDP 180 RRAARLMRNR ESAQLSRQRK KRYVEELEEK VKSMHSVIND LNSRISFVMA ENATLRQQMG 240 SGGGSGPPPG VVYPPAPLPG MPFPWIPGYA MRPHGSHVPL VPIPRLKPQQ TASAAKVSKK 300 PEIKKSAEAR YLSPPGKDKN SQEASPADAP LPQWFREGME GPILNSGSAS SGGIIPASSI 360 VNSSANATQK IPTPASAARK LKNRRIMYNE AIPLTGKTVN DTQPRSLNRT SESSKFPDTD 420 RKPASSVIVS VLADPREAGN GDGDPRVSPK PLSRIFVVVL LDGVRYVTYS CTLPFKGVGP 480 HLVN |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22084314}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269|PubMed:22084314}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | NP_001148077.1 | 1e-141 | uncharacterized protein LOC100281685 | ||||
Swissprot | Q6AU90 | 1e-103 | BZP39_ORYSJ; bZIP transcription factor 39 | ||||
TrEMBL | A0A0A9JME2 | 1e-167 | A0A0A9JME2_ARUDO; Uncharacterized protein | ||||
STRING | GRMZM2G045236_P01 | 1e-140 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8228 | 35 | 45 |
Publications ? help Back to Top | |||
---|---|---|---|
|