PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02274.1.g00130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 344aa MW: 37248.8 Da PI: 9.468 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 40.3 | 9.9e-13 | 64 | 195 | 8 | 126 |
NAM 8 hPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr..at 78 hPtd l+ +yL++ ++ ++ + + +++ +diy + P +L + + ++ + wyf + + +g r r t Zmw_sc02274.1.g00130.1.am.mk 64 HPTDLALIEDYLRPWLTFDRapPPSAPFVHVADIYAAGPTELTArfapavSRGGGGRAWYFLTLLRPMFGKGIRFARvvDT 144 9**************99888544444558888**********854677543334778********************5448 PP NAM 79 ksgy.Wkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmhey 126 ++g W+ + ++++v+++ +g++vg + + f r + ++t W+m Zmw_sc02274.1.g00130.1.am.mk 145 RDGWwWRCQSSERPVVDAgaapGGKQVGRCQDFWFR--RIVDRVRTGWIMRAL 195 89984678999*****99888889999*99999998..677778******865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.567 | 57 | 217 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.8E-6 | 63 | 194 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.68E-20 | 64 | 216 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence Send to blast |
MGFRKKSRAV AFLTCGPHRL RPSPIYSPRR FRRPPPVPSP TLITSPTDTP NMRSRRVAHL 60 VASHPTDLAL IEDYLRPWLT FDRAPPPSAP FVHVADIYAA GPTELTARFA PAVSRGGGGR 120 AWYFLTLLRP MFGKGIRFAR VVDTRDGWWW RCQSSERPVV DAGAAPGGKQ VGRCQDFWFR 180 RIVDRVRTGW IMRALRVGCG DGGLKEEVRV LCKVYRNPRL PADPSYSEPT AVQSREGAEE 240 DEDEDDGCAS SAAGAPVPGG RDEKAANGEG YGGTSVVLAL PAPAREREPA GSESSIAARK 300 RPHAEDGDEQ SSDAAGSKRR KTEGADTNSS GAPATAPHCP QDAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 298 | 320 | RKRPHAEDGDEQSSDAAGSKRRK |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27445 | 3 | 3 |