PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01574.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 24697 Da PI: 5.5597 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.2 | 1.4e-22 | 43 | 105 | 70 | 129 |
NAM 70 tgkrknratksgyWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrle 129 +g r nrat++++Wkatgkdke+++++ l vg+kk+Lvfy+grapkgekt W+mheyrle Zmw_sc01574.1.g00150.1.sm.mk 43 NGGRINRATNTSFWKATGKDKEIYQASAMLptiVGMKKILVFYTGRAPKGEKTGWIMHEYRLE 105 789**********************74433666****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 24.494 | 1 | 127 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.24E-30 | 19 | 124 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-14 | 22 | 104 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MADHQEQEGI RGGVDDCCMN LPHGFWFHPY DEEIITFYLM PKNGGRINRA TNTSFWKATG 60 KDKEIYQASA MLPTIVGMKK ILVFYTGRAP KGEKTGWIMH EYRLEGSGKL YFPTSSSNST 120 ISKVVPDPHA FHVFKSSRNK EVHVPQSEEA RANNDIDQST MSFSTSIQFS TGPEDDFLVE 180 LGVLCPNMDP TMPFYSTTDA STSVAPMMPP MTSMGTMGID GI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-16 | 19 | 104 | 13 | 140 | Stress-induced transcription factor NAC1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025801540.1 | 8e-46 | NAC domain-containing protein 79-like | ||||
TrEMBL | A0A1E5V4C4 | 2e-49 | A0A1E5V4C4_9POAL; NAC domain-containing protein 79 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27924 | 3 | 5 |