PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01486.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 125aa MW: 13287.2 Da PI: 6.232 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 28.1 | 4.2e-09 | 3 | 50 | 19 | 58 |
SS-EEEEEE-ST...T---EEEEEE-SSSTTE.....EEEEEES--SS CS WRKY 19 efprsYYrCtsa...gCpvkkkversaedpkv.....veitYegeHnh 58 + rsYYrCt + gCp+k+ v+r+++ ++ +++Y H++ Zmw_sc01486.1.g00050.1.am.mk 3 AHCRSYYRCTWSaeqGCPAKRTVQRNDDGDDIggspkYTVVYMAVHTC 50 578*******988889**********9654432222367888888887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 8.662 | 1 | 28 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.7E-6 | 2 | 52 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.9E-10 | 3 | 50 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.4E-9 | 3 | 51 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.23E-9 | 4 | 51 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
MAAHCRSYYR CTWSAEQGCP AKRTVQRNDD GDDIGGSPKY TVVYMAVHTC TANDSMEKPV 60 ILETTAVQAA YKKPCGAKNI ATPAAFLPPP AVESAAAAES SIPILHAVLK IEPDVSLASG 120 EMKCE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004977390.1 | 5e-28 | probable WRKY transcription factor 58 | ||||
TrEMBL | A0A0A9HC42 | 3e-28 | A0A0A9HC42_ARUDO; Uncharacterized protein | ||||
STRING | Si010813m | 2e-27 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5760 | 30 | 58 |