PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01084.1.g00140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 320aa MW: 35982.6 Da PI: 5.0393 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56 | 1.4e-17 | 13 | 115 | 1 | 91 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk......kvkaeekewyfFskrdkkyatgkrk 74 lppGfrF+ tdeel+ +yL++k+++ + +++evd+yk+ePwdL p+ +e++ yfF+ r+ k ++g r+ Zmw_sc01084.1.g00140.1.sm.mk 13 LPPGFRFRRTDEELLAHYLARKAADAGFYS-AAVREVDLYKAEPWDLlPAagggggDDGSEDSCRYFFCARRVKFPSGLRS 92 79*************************888.78**************544455543222244455*********9977765 PP NAM 75 nra......tksgyWkatgkdke 91 + + +++ W+ +g + Zmw_sc01084.1.g00140.1.sm.mk 93 EDQqgdarrVQEVHWEGQGVAAT 115 54323333367888998887554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.75E-19 | 9 | 93 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.642 | 13 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.3E-9 | 14 | 111 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence Send to blast |
MGNDNCDRPC TGLPPGFRFR RTDEELLAHY LARKAADAGF YSAAVREVDL YKAEPWDLLP 60 AAGGGGGDDG SEDSCRYFFC ARRVKFPSGL RSEDQQGDAR RVQEVHWEGQ GVAATARLRR 120 RRWRQPSWGE EDARAALLEE RRPVGSCTST GLYMDTTLLL KLQQEEQLRM FMKKPPGEET 180 TPYQEKILRP LVDDHHMQIM PTGGKTPAAA TVAAGSEHVS CFYDDAEAKT PDDHEKFQSL 240 PQLNPEELLL NWPEQDDLPS SVLAQATVLY EEVAASSSCD LLPCTAARLR CMMYRVYLYV 300 LQKCIIQYTV PLARLENSLT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-12 | 12 | 112 | 14 | 101 | Stress-induced transcription factor NAC1 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 116 | 123 | RLRRRRWR |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP43933 | 3 | 3 |