PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01064.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 651aa    MW: 70477 Da    PI: 10.0334
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01064.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.82.4e-09434453221
                                   --SS-EEEEEEE--TT-SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefp 21 
                                   +Dg++WrKYGqK++k++++p
  Zmw_sc01064.1.g00040.1.am.mk 434 SDGFKWRKYGQKSIKNNPYP 453
                                   7******************9 PP
2WRKY47.14.8e-154885232358
                                   EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY  23 sYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                                   sYY+Cts++C +kk+ve+s +dp+++++tYeg H h
  Zmw_sc01064.1.g00040.1.am.mk 488 SYYKCTSSRCGAKKHVEKSVDDPEMLIVTYEGPHLH 523
                                   9*********************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-25427453IPR003657WRKY domain
PROSITE profilePS5081119.933428526IPR003657WRKY domain
SuperFamilySSF1182903.92E-7431454IPR003657WRKY domain
SMARTSM007743.9E-26433525IPR003657WRKY domain
PfamPF031064.3E-6435454IPR003657WRKY domain
SuperFamilySSF1182902.35E-11485525IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-25487524IPR003657WRKY domain
PfamPF031061.6E-10487523IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MVNAWSSLRP ITSIYAANKD FRRRATNGAP VRRRWKWNES RFRLASPMPT PRALRLTTRR  60
SRRIDERTMM TTPGALSRMK MMAVKFVLPE ATLATCRSIR NCPGKATRIR FTSMHPFLTV  120
EPVRKTVGLV LSVATASRIS DRSTIDVASL PATHGGSFTC GPDRIDERFR RLSLSSLAAD  180
DRLPPSRAQF EMNSLQRFRG CNGRGGDAAG RRGSCRCRRS YRHLIEKRLC RDQGTLICPL  240
LAAWPAFSCR VAAALRHPLS RRCRRAPPSH ACDAIALSEV STARRYALPG DEATTDGAAA  300
LWPGELDEQL ISELLSDDSL LGPLHGPAGD SAHYCSGDAG PVDAAAPTPC NSGGDGTAAE  360
REVPQPAAVN RALCSVYSGP TIQDIEKALS SSRPCHWMSN RRYSSSIGRF GATSTAPESK  420
YTTKVRTCAG KMPSDGFKWR KYGQKSIKNN PYPSVGRRLY DRSLHIRVVV RCRALVDKIG  480
MAECCGWSYY KCTSSRCGAK KHVEKSVDDP EMLIVTYEGP HLHGPQPPFP RRQWTSADFL  540
SGAAATRRGA EAPSPPLTAS SGGAHPNNQP HTCDAAAGAR GGGVSVVADG RENGRAEADV  600
VVKATRSCDG CSGASVAAPG DGTALPCDSP PTTWSCPNSY FSSWSLEALL P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004970545.17e-89WRKY transcription factor WRKY24 isoform X1
TrEMBLA0A2T7DEI57e-89A0A2T7DEI5_9POAL; Uncharacterized protein
STRINGSb03g039550.12e-79(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131442633