PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00786.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 327aa    MW: 34765 Da    PI: 6.9894
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00786.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.62.2e-27138199159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +dD y+WrKYGqKe+ g+ +pr+YYrCt++   gC ++k+v+r++edp +++++Y g+H+++
  Zmw_sc00786.1.g00020.1.am.mk 138 MDDSYSWRKYGQKEILGAMHPRAYYRCTHRnsqGCAATKQVQRTDEDPALFDVIYLGTHTCR 199
                                   59***************************98889**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.136133201IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.4E-27135199IPR003657WRKY domain
SuperFamilySSF1182902.35E-25136200IPR003657WRKY domain
SMARTSM007742.7E-38138200IPR003657WRKY domain
PfamPF031068.1E-26139199IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MRAPLLRVAP SLACLVSKST RLREALAPLG LKKKAAHSDR QGAPCDQAMD NFDGNGGSGG  60
SRLLAVTELG HIKELLKQLE EHLGGGSRDL CKRLASQIFS HAERSIGIIS SADFNKRSAA  120
GDGLAAVTPG SLGGETPMDD SYSWRKYGQK EILGAMHPRA YYRCTHRNSQ GCAATKQVQR  180
TDEDPALFDV IYLGTHTCRV HKMAPDAEAD QAAAATQPPQ RNTDARRRSL PLNLTVKTQP  240
QGRISSATPF GAFSASGNWD GASPAATSDS NHVASLPPFE AAEWRAQSAL QEVVSALVVA  300
GAPPATAVDM DVTDDELLDI DVSCFFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-23138199869OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025800891.17e-77probable WRKY transcription factor 30
TrEMBLA0A2S3GYW52e-75A0A2S3GYW5_9POAL; Uncharacterized protein
STRINGPavir.Ba02545.1.p3e-77(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131