PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00748.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 643aa MW: 69840.4 Da PI: 9.9926

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00748.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	36.2	1.7e-11	317	405	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 + rlws+eD i +L +l +++g p+ d + v++s++ + s s+l e++rrLK++++k v+k + s+ Zmw_sc00748.1.g00070.1.am.mk 317 APRLWSKEDSIKVLEALAAHVKSEGRLPKTD--ILLAAVRDSLDrKDCSYSDLYERVRRLKERYEKTVNK-----GVLPSE 390 579***************99999776665..58999*72579*******************9.....344456 PP DUF573 83 ehdqkifelskkiWg 97 e++ ++ +ls+ +Wg Zmw_sc00748.1.g00070.1.am.mk 391 EDELQMHNLSEAVWG 405 666789999999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.1E-15	318	405	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence Send to blast
MAQRIQGAPC GSCNGVRQHE QSISNIVILI ADPAEFPVSA ARDDMASGLS PARRWRARWW 60 INLPLALDMG CRDGKKNPRP AVDATVRVSR SLPRFHPTLP FRRQSLALAP MARKRRAPSP 120 APPPPPPQES SSETGSDTEE EEDSPRAAAS KKQPQNPQLQ ALAAAANGAD SDADTDADLQ 180 AFQMRRVTRS PAKPGAPTPQ PGTDADEEEK DGESSESEPE VPDPVPKKAA VAKKAKAVEE 240 DKKRAAPEAA PSRKGKKVKA EPPASPTGKG KKAKAEPEKP APEATPSGKA KKPGGKPEKS 300 GLDSTPPSTK SEKSARAPRL WSKEDSIKVL EALAAHVKSE GRLPKTDILL AAVRDSLDRK 360 DCSYSDLYER VRRLKERYEK TVNKGVLPSE EDELQMHNLS EAVWGEKAKE AIAAAAASQN 420 GSTVTDSKKG QANKEKMDGN SRGDTSKEVV NQNGGTRKGG KKGQAINENP DMDVKRKIFK 480 EDSATGTSNK TKKQGNEKEE LGKSVKNGTS NETPTKNGDT LTKRKRGKMV PKEASTDRQN 540 VGSQAEDATH PEEEEIGAAI QGMRRSFDEL QNLYPSLAWS VERMAVQHPC GETLKRAFEF 600 IHDDKANALE SKFKKQRISD VKVHVRRLDI SKEVLNMLLS PAD

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence Send to blast

MAQRIQGAPC GSCNGVRQHE QSISNIVILI ADPAEFPVSA ARDDMASGLS PARRWRARWW  60
INLPLALDMG CRDGKKNPRP AVDATVRVSR SLPRFHPTLP FRRQSLALAP MARKRRAPSP  120
APPPPPPQES SSETGSDTEE EEDSPRAAAS KKQPQNPQLQ ALAAAANGAD SDADTDADLQ  180
AFQMRRVTRS PAKPGAPTPQ PGTDADEEEK DGESSESEPE VPDPVPKKAA VAKKAKAVEE  240
DKKRAAPEAA PSRKGKKVKA EPPASPTGKG KKAKAEPEKP APEATPSGKA KKPGGKPEKS  300
GLDSTPPSTK SEKSARAPRL WSKEDSIKVL EALAAHVKSE GRLPKTDILL AAVRDSLDRK  360
DCSYSDLYER VRRLKERYEK TVNKGVLPSE EDELQMHNLS EAVWGEKAKE AIAAAAASQN  420
GSTVTDSKKG QANKEKMDGN SRGDTSKEVV NQNGGTRKGG KKGQAINENP DMDVKRKIFK  480
EDSATGTSNK TKKQGNEKEE LGKSVKNGTS NETPTKNGDT LTKRKRGKMV PKEASTDRQN  540
VGSQAEDATH PEEEEIGAAI QGMRRSFDEL QNLYPSLAWS VERMAVQHPC GETLKRAFEF  600
IHDDKANALE SKFKKQRISD VKVHVRRLDI SKEVLNMLLS PAD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824313.1	1e-134	recombination repair protein 1-like
TrEMBL	A0A3L6QKN4	1e-141	A0A3L6QKN4_PANMI; Hepatoma-derived growth factor-related protein 2-like
STRING	Pavir.Ab01142.1.p	1e-132	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7289	27	37