PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00522.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 802aa MW: 86663.2 Da PI: 10.3853

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00522.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.4	1.4e-07	689	720	4	36
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRt 36 W t E++ll+ a k++G+g+W++++ +m+ R+ Zmw_sc00522.1.g00010.1.am.mk 689 WDTREELLLASALKRHGTGSWDSVSMEMQ-SRC 720 99***************************.998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00717	0.0034	685	743	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	8.3E-4	689	721	IPR009057	Homeodomain-like
Pfam	PF00249	3.4E-6	689	721	IPR001005	SANT/Myb domain
CDD	cd00167	8.23E-5	689	740	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 802 aa Download sequence Send to blast
MLVRSLARPL PFPVKLLSPG RPSDAHVGGA WPACYELSVR RFRPPSCRLL PACLLLCKVN 60 DRGRHSVGQG GHWEGTVAGI VQLFQGSGWG DDRTTATVQP VAPRTRPISS LERPSGQAEW 120 VQRGLISLHP LGRKLRSFLA AQSPALCDYP AAETMKASIK FRDDDRPLMR AKSGLSAGGD 180 PRELRFDLST TFSSGPALRL SYRPNDPGLP FALTVRAGVG PLGSPGRAPF VIAAEFNLLS 240 SDPSSPAFFL RLKPRLGDFS LGHTIRSSAV PAPAPRTIVE ASDGDGEGHE VNYKAFSFSG 300 NGIAAAGRSG GLGLGALLSG MRLTTRSVLP LWGRASLRFN WGLRVPPELQ PGALADGHSK 360 GARAPVSKMP LLVMSKISIE QSPRSDGVRK CARADASVAA TADGSDGSGH GGGEEVAFSL 420 VRRQLEELNV ENVMLRRAVE DLRAEIRSSM DASPAAPRVD ARRSPPPPQP QSHSFLAKPD 480 RRGNGKEPAA ENAKKASAVA VDDVGEELKK ALEARRRLPR HEPSHGVLPR RKQRETPDVD 540 NDKKKPVRLH VHVSLRENNR VTHNTISEII ARLCPSCNLR RLLHPRSRFT GQCTTESYIL 600 RPLLDEPHGE GALPQIAGGD EARSPNQTNQ TLATFHFYPW RRRYEPPRPL KPRRRSGRAE 660 ESGMTPRSDD PDVAPGPVPV SAAAGGEIWD TREELLLASA LKRHGTGSWD SVSMEMQSRC 720 VSAADARFTP SGCRQRALLL HRRFAAGGGG DDDGDPDAAA ADALVEKLRK LRCDELRRAV 780 EQHDLLIGAA PGDPSDAYRS VA

Sequence ? help Back to Top

Protein Sequence Length: 802 aa Download sequence Send to blast

MLVRSLARPL PFPVKLLSPG RPSDAHVGGA WPACYELSVR RFRPPSCRLL PACLLLCKVN  60
DRGRHSVGQG GHWEGTVAGI VQLFQGSGWG DDRTTATVQP VAPRTRPISS LERPSGQAEW  120
VQRGLISLHP LGRKLRSFLA AQSPALCDYP AAETMKASIK FRDDDRPLMR AKSGLSAGGD  180
PRELRFDLST TFSSGPALRL SYRPNDPGLP FALTVRAGVG PLGSPGRAPF VIAAEFNLLS  240
SDPSSPAFFL RLKPRLGDFS LGHTIRSSAV PAPAPRTIVE ASDGDGEGHE VNYKAFSFSG  300
NGIAAAGRSG GLGLGALLSG MRLTTRSVLP LWGRASLRFN WGLRVPPELQ PGALADGHSK  360
GARAPVSKMP LLVMSKISIE QSPRSDGVRK CARADASVAA TADGSDGSGH GGGEEVAFSL  420
VRRQLEELNV ENVMLRRAVE DLRAEIRSSM DASPAAPRVD ARRSPPPPQP QSHSFLAKPD  480
RRGNGKEPAA ENAKKASAVA VDDVGEELKK ALEARRRLPR HEPSHGVLPR RKQRETPDVD  540
NDKKKPVRLH VHVSLRENNR VTHNTISEII ARLCPSCNLR RLLHPRSRFT GQCTTESYIL  600
RPLLDEPHGE GALPQIAGGD EARSPNQTNQ TLATFHFYPW RRRYEPPRPL KPRRRSGRAE  660
ESGMTPRSDD PDVAPGPVPV SAAAGGEIWD TREELLLASA LKRHGTGSWD SVSMEMQSRC  720
VSAADARFTP SGCRQRALLL HRRFAAGGGG DDDGDPDAAA ADALVEKLRK LRCDELRRAV  780
EQHDLLIGAA PGDPSDAYRS VA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4217	3	6