PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00506.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 28617 Da PI: 5.4594 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.9 | 5e-05 | 38 | 85 | 1 | 52 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 r++ + erE+ Rd++N+ f eL ++l ++ + + Ka iL +++ ++ Zmw_sc00506.1.g00030.1.sm.mkhc 38 RKVHKAEREKLKRDQLNDLFVELGDMLDED----RQNNGKACILADTTRILR 85 677889*********************997....455666667766666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 1.6E-9 | 34 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.36E-11 | 34 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.633 | 37 | 87 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010106 | Biological Process | cellular response to iron ion starvation | ||||
GO:0055072 | Biological Process | iron ion homeostasis | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MVPSDRGSVA TAVSTAAATD KLPLGPASSK KIQKKAPRKV HKAEREKLKR DQLNDLFVEL 60 GDMLDEDRQN NGKACILADT TRILRDLLSQ VESLRKENST LQSESHYVTM ERDEMRDETS 120 ALCKEILELQ NELTRLSSNS GWGHGTAESD SASAVFPSQQ PVQPPSVAST LIPLQQPLPS 180 TTVIEHPYAA APRELKLFPK AGYEPAEDQE ATNRVTRPQA RYPIQAASWP VSLFSGLPRM 240 EDEQCSSTTT GSSKEASTGR D |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress. {ECO:0000269|PubMed:25617318}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001148562.1 | 1e-118 | amelogenin precursor like protein | ||||
Refseq | XP_008676027.1 | 1e-118 | amelogenin precursor like protein isoform X1 | ||||
Refseq | XP_008676033.1 | 1e-118 | amelogenin precursor like protein isoform X1 | ||||
Refseq | XP_008676036.1 | 1e-118 | amelogenin precursor like protein isoform X1 | ||||
Swissprot | Q69V10 | 4e-80 | BH062_ORYSJ; Transcription factor BHLH062 | ||||
TrEMBL | B8A2P8 | 1e-117 | B8A2P8_MAIZE; BHLH transcription factor | ||||
STRING | GRMZM2G350312_P02 | 1e-118 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2481 | 38 | 84 |
Publications ? help Back to Top | |||
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