PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00347.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 252aa MW: 28072.3 Da PI: 4.984 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 41.9 | 3e-13 | 38 | 110 | 67 | 128 |
NAM 67 kyatgkrknra..........tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +y g+rk+r ++ +W++tgk+k++++ +g ++g kk+Lv+yk r ++e++ Wvmh+y+l Zmw_sc00347.1.g00050.1.sm.mkhc 38 AYGCGQRKRRRvitctdhtvsDEHMRWHKTGKSKAIYN-NGVKKGWKKILVLYKTpqRGGRPERAPWVMHQYHL 110 67778888885477776655445788************.999***********7533666778*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.482 | 1 | 129 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.4E-23 | 2 | 129 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.4E-10 | 9 | 110 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
VAVQWPGLPA GVKFDPSDLQ LLEHLENKIG VGGSEPHAYG CGQRKRRRVI TCTDHTVSDE 60 HMRWHKTGKS KAIYNNGVKK GWKKILVLYK TPQRGGRPER APWVMHQYHL GEEEDEKDGE 120 LVLSKVFYQL PTKHKENAEA ETDDEEPDAF AAGIGPKTPK TNTPQPRRAN NSPCETEHNA 180 SILLDQDEEL TIPIVGPDDD DVGNHALCTG ETQIVGEALR AQPSLDESLL CLEDPEIQFG 240 SQESIGSWLD RI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 43 | 47 | RKRRR |
2 | 44 | 48 | KRRRV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015688975.1 | 1e-100 | PREDICTED: NAC domain-containing protein 73 | ||||
TrEMBL | A0A3L6QEE7 | 1e-105 | A0A3L6QEE7_PANMI; NAC domain-containing protein 73-like | ||||
STRING | Pavir.Aa01341.1.p | 1e-107 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2110 | 37 | 99 |