PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00148.1.g00350.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 435aa MW: 46297.7 Da PI: 6.1953

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00148.1.g00350.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	30.3	1.2e-09	75	105	2	32
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsd 32 lfqrlw++eDeiv+L+++ +f+a++g+ + Zmw_sc00148.1.g00350.1.am.mk 75 LFQRLWTDEDEIVILRAFAEFTAQRGTAFAS 105 69************************95444 PP
2	DUF573	98.7	5.5e-31	128	226	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkeps 79 ++rlw++eDeiv+L+++ +f+a++g+ +++ d++ fye ++++++ ++ksqlveK+rrLK+K++++v++ + g ++s Zmw_sc00148.1.g00350.1.am.mk 128 PRRLWTDEDEIVILRAFAEFTAQRGTafASHQyDTTPFYEDMRGRLQTGFTKSQLVEKLRRLKRKYRNCVDRlRVAGPSFS 208 68**********************9977778***********************************88899 PP DUF573 80 fskehdqkifelskkiWg 97 f+++h+q ife+++ iW+ Zmw_sc00148.1.g00350.1.am.mk 209 FRSPHEQAIFEIARTIWR 226 ***************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.4E-28	129	225	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
MFPMVDDPSA AAGGGAMVSS SFPDADAYGN GNGDSEDIDF PAGPNSHASF SAAPATTAAT 60 SAGAGGPGSG ERRALFQRLW TDEDEIVILR AFAEFTAQRG TAFASHQTCA AASRPGSPRA 120 SSXXXXRPRR LWTDEDEIVI LRAFAEFTAQ RGTAFASHQY DTTPFYEDMR GRLQTGFTKS 180 QLVEKLRRLK RKYRNCVDRL RVAGPSFSFR SPHEQAIFEI ARTIWRPGSD KHGRDSDDEG 240 NEDALAVDAA AAAAAAAAGA RVNGDSARSP SSRSRRGRRR RKGDFPATDT AEALPPAPMP 300 AMTTEDALPS FPQPTAMDGG TITMDPAAAG LPAVLSAAAT VATPGTAENP ILASLFKEMI 360 RSMLNISSSS APLGLEPPPP AIPGMPMDGE KWRQQRILEL EVYLRRIALL QDQAQAALEE 420 LRSAPPHHGA GGMNT

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

MFPMVDDPSA AAGGGAMVSS SFPDADAYGN GNGDSEDIDF PAGPNSHASF SAAPATTAAT  60
SAGAGGPGSG ERRALFQRLW TDEDEIVILR AFAEFTAQRG TAFASHQTCA AASRPGSPRA  120
SSXXXXRPRR LWTDEDEIVI LRAFAEFTAQ RGTAFASHQY DTTPFYEDMR GRLQTGFTKS  180
QLVEKLRRLK RKYRNCVDRL RVAGPSFSFR SPHEQAIFEI ARTIWRPGSD KHGRDSDDEG  240
NEDALAVDAA AAAAAAAAGA RVNGDSARSP SSRSRRGRRR RKGDFPATDT AEALPPAPMP  300
AMTTEDALPS FPQPTAMDGG TITMDPAAAG LPAVLSAAAT VATPGTAENP ILASLFKEMI  360
RSMLNISSSS APLGLEPPPP AIPGMPMDGE KWRQQRILEL EVYLRRIALL QDQAQAALEE  420
LRSAPPHHGA GGMNT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025794014.1	1e-146	probable transcription factor At3g04930
TrEMBL	A0A2T7CC96	1e-144	A0A2T7CC96_9POAL; Uncharacterized protein
TrEMBL	A0A2T8I4R3	1e-144	A0A2T8I4R3_9POAL; Uncharacterized protein
STRING	GRMZM2G026417_P01	1e-141	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP974	37	123