PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00124.1.g00350.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 117aa    MW: 13075.7 Da    PI: 5.9277
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00124.1.g00350.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.3e-0745841554
                                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                    +i +  ++L++llP+a  +++ ++  a +L++++ YI+sL
  Zmw_sc00124.1.g00350.1.am.mkhc 45 QISDLVSKLQDLLPEARLQSNARVPSARVLQETCSYIRSL 84
                                    789999*********889********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.106.3E-829103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.6263084IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-843104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-44584IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MAPSEYDARA DEYKNDATLA TTLIKMSSRR SRSRQSGSSR ITEEQISDLV SKLQDLLPEA  60
RLQSNARVPS ARVLQETCSY IRSLHREVDG LSERLSELLA TSDMSSAQEA VIRSLLM
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway (By similarity). {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway. {ECO:0000269|PubMed:22363621}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985540.22e-43transcription factor ILI6
RefseqXP_025792686.12e-43transcription factor ILI6 isoform X1
RefseqXP_025792687.12e-43transcription factor ILI6 isoform X1
RefseqXP_025792688.12e-43transcription factor ILI6 isoform X1
SwissprotB8APB54e-41ILI6_ORYSI; Transcription factor ILI6
SwissprotQ0DUR24e-41ILI6_ORYSJ; Transcription factor ILI6
TrEMBLA0A2T7CH024e-42A0A2T7CH02_9POAL; Uncharacterized protein
STRINGSb01g045710.19e-43(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26753378