PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00095.1.g00100.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 414aa    MW: 44562.9 Da    PI: 8.741
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00095.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.15.6e-26230289258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   dDg++WrKYGqK++ g+++pr+Y+rCt++   gCp++k+v+r+++dp v++++Y+geH+ 
  Zmw_sc00095.1.g00100.1.am.mk 230 DDGHSWRKYGQKDILGARHPRAYHRCTYRssqGCPATKQVQRTDSDPAVIDVVYHGEHTR 289
                                   8**************************998889*************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-25218289IPR003657WRKY domain
PROSITE profilePS5081122.641224292IPR003657WRKY domain
SuperFamilySSF1182903.4E-23227289IPR003657WRKY domain
SMARTSM007741.3E-34229291IPR003657WRKY domain
PfamPF031067.4E-24230288IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MSCRIMVLSS GKHVFDYSSD AQTGLKIGLV CPRTPVDGQA STGGESQWAE RLAKTVERVP  60
DSAQCYGAGP NPARNGAAIQ RKRPRPNPTR HGESQSQGGL LHLDRSLLPS SSSSPTTPGI  120
EQSTTSFAAM DGASVQRQQL VTDLCHVQDL LRELDLHLHS PSSYSVDQCR RLAAEIVALT  180
DRSIGMAAAA VLRCAQSAQR RRLRPRKATA RWSGQVRVSC AAGAAKGPAD DGHSWRKYGQ  240
KDILGARHPR AYHRCTYRSS QGCPATKQVQ RTDSDPAVID VVYHGEHTRR SAVSGARKTP  300
QHNAHAEGLV ARLTVATTDA AVPPMTPESC PPRGAPSPWS LASPVGSDSN TVYPCPVNWP  360
LDGDLQEVVS AFAVRSGGAH QTALDPEIMR PEYLGNFDYQ SFDIGALETM QSLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-18230290969OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18185KRPRP
2200206RRLRPRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820899.13e-79probable WRKY transcription factor 41
TrEMBLA0A1E5V0M81e-79A0A1E5V0M8_9POAL; Putative WRKY transcription factor 41
STRINGPavir.Fa01520.1.p3e-81(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131