PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00093.1.g00270.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 263aa    MW: 28399.8 Da    PI: 5.2018
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00093.1.g00270.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.83.8e-22101159257
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 
                                   dDg+ WrKYG K + ++++ r Y+rC+++   gC +kk+v++++edp+++++tY geH+
  Zmw_sc00093.1.g00270.1.sm.mk 101 DDGFVWRKYGEKIISDQRYRRFYFRCSYRdehGCGAKKQVQQTQEDPSLFQTTYFGEHT 159
                                   8***************************99999*************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-2394160IPR003657WRKY domain
PROSITE profilePS5081120.19795163IPR003657WRKY domain
SuperFamilySSF1182902.35E-2298162IPR003657WRKY domain
SMARTSM007742.0E-28100164IPR003657WRKY domain
PfamPF031064.7E-22101159IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MATTAESTSA ACELVAGARE PAVRLLALLQ AIGADSDKQS LAKQIIRCID RALAAVRGAG  60
DDKKRRPPTH GPTTRPPAGS SKRRVTGRGE TGARVVSSTI DDGFVWRKYG EKIISDQRYR  120
RFYFRCSYRD EHGCGAKKQV QQTQEDPSLF QTTYFGEHTP ACPRDDAPVA VVDRTSVPQV  180
PFLASSSVGA GNDSLCHGDD EAPPSLPVKA ELMQANVAEF TEDCPVDDRL MEWASADVSF  240
ASPASVGLES LDGLEELISL LWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-1595159367OsWRKY45
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00070PBMTransfer from AT5G01900Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025810145.12e-64probable WRKY transcription factor 38
TrEMBLA0A2T7ECH45e-68A0A2T7ECH4_9POAL; Uncharacterized protein
STRINGPavir.J05250.1.p1e-68(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1869769