PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00078.1.g00210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 339aa MW: 35390.1 Da PI: 8.0229 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.1 | 3.8e-13 | 279 | 322 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a++ eLe +v+ L++ N +L+k+ Zmw_sc00078.1.g00210.1.sm.mk 279 RRQRRMIKNRESAARSRARKQAYTMELEAEVQMLKEINAELQKK 322 79*************************************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-13 | 275 | 339 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.496 | 277 | 322 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.83E-26 | 279 | 333 | No hit | No description |
SuperFamily | SSF57959 | 3.19E-11 | 279 | 323 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-14 | 279 | 322 | No hit | No description |
Pfam | PF00170 | 2.9E-11 | 279 | 322 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 282 | 297 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MDPKDGERRG PPARQGSIYS LTFDEFQSTL GGMAGGGLGK DFGSMNMDEL LRSIWTAEES 60 QAMASASGSG TAALGAGDDG ALQRQGSLTL PRTLSVKTRQ GSLTLPRTLS VKTVDEVWRD 120 FAREGAPSAG GCGGEPQPSR QPTLGEMTLE EFLVRAGVVR ENPAAAGFPA PIQAVNNGSS 180 IFFGNFGGAA SDTGAGAMGF APVGIGNPSA MGNGLMPGMA GMGGAAVTVS PVDTSVAQLD 240 SVGKGNSDLS SPMAPLPCPF EGVIRGRRSG AGVEKVVERR QRRMIKNRES AARSRARKQA 300 YTMELEAEVQ MLKEINAELQ KKQCVFLLAV YLARVFPDV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00087 | SELEX | Transfer from AT1G49720 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004973666.1 | 1e-141 | bZIP transcription factor TRAB1 | ||||
Swissprot | Q6ZDF3 | 1e-119 | TRAB1_ORYSJ; bZIP transcription factor TRAB1 | ||||
TrEMBL | K3YI35 | 1e-141 | K3YI35_SETIT; Uncharacterized protein | ||||
STRING | Si013904m | 1e-141 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Publications ? help Back to Top | |||
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