PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00066.1.g01030.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 145aa    MW: 16073.5 Da    PI: 10.9555
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00066.1.g01030.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.97.2e-2199145248
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkS 48 
                                    r+rWtpeLHe+Fveav+ LGGsekAtPk++ ++mkvk+   + v+S
  Zjn_sc00066.1.g01030.1.sm.mk  99 LRMRWTPELHEQFVEAVNLLGGSEKATPKAVQKVMKVKDPKKAAVAS 145
                                   69***********************************9877777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.63E-895138IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-1697145IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-1498137IPR006447Myb domain, plants
PfamPF002492.4E-6100134IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MTPEKKTHKY RNCEKGAWKT VWAPRGGGLV RGFVDLLGLA GGRTSSAASA TWRCGEVKNA  60
RRWPWALFFE EDVDARSLTP KNHLLRSSLP SSSTTPTKLR MRWTPELHEQ FVEAVNLLGG  120
SEKATPKAVQ KVMKVKDPKK AAVAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A8e-1598136139Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-1598136139Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-1598136139Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-1598136139Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-1598136240Protein PHOSPHATE STARVATION RESPONSE 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2846235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.13e-14phosphate starvation response 1