PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00003.1.g13870.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 458aa MW: 49660.5 Da PI: 10.1489

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00003.1.g13870.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.8	2.1e-07	316	358	15	57
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++A rs +RK +i++Le+kv+ L++e ++L +l l+ +a Zjn_sc00003.1.g13870.1.am.mk 316 ISAARSKERKMRYIAKLEQKVQILQTEATTLSAQLTLLQRDSA 358 69********************************999987766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.4E-4	310	366	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.19E-14	316	358	No hit	No description
SuperFamily	SSF57959	4.1E-6	316	356	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.0E-6	316	357	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence Send to blast
MHFPPVAGLT NAQLPTAGVL QSQYLQDLAK AKLALHSTVP AASPGTAQTA ARHAASATLL 60 AERLLLVTSR PPGEHTKGPR KGNETKTGCR GERSSQCRRG EQRLATPPQG PPPLPHEGGT 120 TKRRLNTHKS ARPAKHRSIR SHRRAPLPPR AADACMDVEH AARKAAAHRR SRSDVPLGYF 180 PPPKVEAGLG GHHDADDLFT AFLNLEGLDG LHNPSDERHD DGDRDSRGSS MKMTNGADSS 240 ENESEEGAAD DRRPAGVRLW TADAINRLEG LNVKRSAAGE PSTAPTVRHA RSLSVDSLIG 300 KFNFSAGGTT SATSGISAAR SKERKMRYIA KLEQKVQILQ TEATTLSAQL TLLQRDSAGI 360 ATQNNELKFR LQAMERQAQL RDALNEALTA EVQRLKLATA ELGDSCSSNN IVQQIQLNVQ 420 EQMFQLQKQQ QQQATPIPFY QLQQPQQSGA AKNHESEE

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence Send to blast

MHFPPVAGLT NAQLPTAGVL QSQYLQDLAK AKLALHSTVP AASPGTAQTA ARHAASATLL  60
AERLLLVTSR PPGEHTKGPR KGNETKTGCR GERSSQCRRG EQRLATPPQG PPPLPHEGGT  120
TKRRLNTHKS ARPAKHRSIR SHRRAPLPPR AADACMDVEH AARKAAAHRR SRSDVPLGYF  180
PPPKVEAGLG GHHDADDLFT AFLNLEGLDG LHNPSDERHD DGDRDSRGSS MKMTNGADSS  240
ENESEEGAAD DRRPAGVRLW TADAINRLEG LNVKRSAAGE PSTAPTVRHA RSLSVDSLIG  300
KFNFSAGGTT SATSGISAAR SKERKMRYIA KLEQKVQILQ TEATTLSAQL TLLQRDSAGI  360
ATQNNELKFR LQAMERQAQL RDALNEALTA EVQRLKLATA ELGDSCSSNN IVQQIQLNVQ  420
EQMFQLQKQQ QQQATPIPFY QLQQPQQSGA AKNHESEE

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU971509	1e-108	EU971509.1 Zea mays clone 366380 DNA binding protein mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025796879.1	1e-134	transcription factor RF2b-like
TrEMBL	A0A2S3IUN2	1e-132	A0A2S3IUN2_9POAL; Uncharacterized protein
STRING	Si035841m	1e-130	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3536	35	76

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	2e-25	bZIP family protein