 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016648082.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 335aa MW: 38092.8 Da PI: 4.7143 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016648082.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.5 | 5.6e-19 | 98 | 152 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
k++++t +q++ Le+ Fe ++++ e++++LAk+lgL+ rqV +WFqNrRa+ k+
XP_016648082.1 98 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKN 152
56689***********************************************995 PP
|
| 2 | HD-ZIP_I/II | 127.1 | 7.8e-41 | 98 | 189 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrl+ +qv++LE++Fe e+kLeperK++la+eLglqprqva+WFqnrRAR+k+kqlEk+y++Lk+++d+lk+++++L ke+ +L++e+++
XP_016648082.1 98 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKNKQLEKEYDSLKASFDKLKADHDNLLKENGSLKNEIDS 189
9**************************************************************************************99875 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MLFFKTKSSL ALLTFLSLFG FPLLPPLFML LISVPLCKQN GETFINRRKI EKTPPSSNSV 60
VNFESASGED SLDRSFFRPI DKENGDDDYD ASLNQPGKKR RLTVDQVQFL EKNFEVENKL 120
EPERKAQLAK ELGLQPRQVA IWFQNRRARF KNKQLEKEYD SLKASFDKLK ADHDNLLKEN 180
GSLKNEIDSL KDMLILKDKG KPGKRNLELH DANNIILSDV KPQSATPNAA SDNVPMVVCK 240
QEDASSAKSD VFDSDSPHCT ENHSSLLEPA DSSHVFEPAE QSDFSQDEDD DLSRTLLPPP 300
YFLKLEDSCY DEPPASSSNF VFPMEDQQPF CFWPY
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 145 | 153 | RRARFKNKQ |
