PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016449095.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HD-ZIP
Protein Properties Length: 764aa    MW: 84266.8 Da    PI: 5.3502
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016449095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.35.6e-1874128256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk  ++t +q+ eLe++F+ n++p+++ r eL kkl+++ +qVk+WFqNrR+++k
  XP_016449095.1  74 RKYSRHTVNQILELETAFKLNPHPNEKVRLELGKKLSMDSKQVKFWFQNRRTQMK 128
                     788899**********************************************998 PP
2START168.74e-532774992205
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     la++a++el+ +a+ +ep+Wv+s     e +n +e+ ++f++  +     +++ea ra+g v+ ++ +lve+l+d + +W e++     k ++++
  XP_016449095.1 277 LALAAMNELLGLAEIGEPLWVRSLdgggETLNLEEYARSFTPCTGmkpghFTTEATRATGTVIVNSLTLVETLMDMS-RWVEMFScivgKTSVVD 370
                     6899************************************99888999999**************************.***************** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vi         + lql+++e+q +s lvp R+  f+R+++q+ +g+w++vdvSvd  q+ ++  ++  +++lpSg+++++++ng+skvtw+eh++
  XP_016449095.1 371 VIPGStcgswsSNLQLIQTEFQIISDLVPaRELKFLRFCKQHAEGVWAVVDVSVDTIQESSQAREIGNCRRLPSGCIVQDMPNGYSKVTWIEHME 465
                     **9999******************************************************99********************************* PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqce 205
                     + ++++h l+r+lv++gl +ga++w+atlqrq e
  XP_016449095.1 466 YYENVVHHLYRPLVRNGLGFGAQRWMATLQRQSE 499
                     *******************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.42E-1759129IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-1760130IPR009057Homeodomain-like
PROSITE profilePS5007116.76370130IPR001356Homeobox domain
SMARTSM003891.9E-1572134IPR001356Homeobox domain
PfamPF000461.9E-1574128IPR001356Homeobox domain
CDDcd000864.61E-1574130No hitNo description
PROSITE profilePS5084840.653267503IPR002913START domain
SuperFamilySSF559614.26E-30269499No hitNo description
CDDcd088755.86E-106271499No hitNo description
SMARTSM002345.4E-42276500IPR002913START domain
PfamPF018522.2E-45277498IPR002913START domain
SuperFamilySSF559619.34E-11530758No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    Send to blast
MYSVELIHSE LVQKPKMESH SDMSEKGESS NNVVMGRPKE EDESESRRSN GDNLNGVASE  60
DEQDSALSNS SKTRKYSRHT VNQILELETA FKLNPHPNEK VRLELGKKLS MDSKQVKFWF  120
QNRRTQMKSQ LERHENGILK QENDRLRIEH IAMQEAMKNP ICNRCRNQAI IADINVEEHQ  180
TKIEYERLKE EVKRISVLAD KLLGPLSSLE GSMASVIANP AFGLPEGING FGGINYANAA  240
SPMGLNFDNG LSSPPPVIST SLANVDVSFD KSMLMDLALA AMNELLGLAE IGEPLWVRSL  300
DGGGETLNLE EYARSFTPCT GMKPGHFTTE ATRATGTVIV NSLTLVETLM DMSRWVEMFS  360
CIVGKTSVVD VIPGSTCGSW SSNLQLIQTE FQIISDLVPA RELKFLRFCK QHAEGVWAVV  420
DVSVDTIQES SQAREIGNCR RLPSGCIVQD MPNGYSKVTW IEHMEYYENV VHHLYRPLVR  480
NGLGFGAQRW MATLQRQSEF LAMLMSSVDT PVVCSSGQTS MAMLAQRMTC NFCAGVCATI  540
HKWESIQQAN GEDAKLMMRK NIGDPGEPIG VMLSATKTIW LPVKQQRLLD FLLNEQTRSQ  600
WDILFNSGPM QQMVHIAKGQ NIDNSISLFR ANGNAISDSE NNMLILQDTC TDATGSLIVY  660
ATIDAADMDV VMNGGDSSSV AFLPSGIAIV PDCFQDYSGA NNCNVGTSWE KDNGFSGTGS  720
LVTIGFQVLV NSSPAAKLSM ESVQKVNNLI SHTIHGIKAA FKSK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016449095.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A1S3YA530.0A0A1S3YA53_TOBAC; homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
STRINGXP_009589494.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]