PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015896959.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | WRKY | ||||||||
Protein Properties | Length: 251aa MW: 28026.8 Da PI: 4.3679 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 55.6 | 1.1e-17 | 83 | 120 | 21 | 58 |
-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +rsYYrCt ++C++kk+vers++dp++++itYeg H h XP_015896959.1 83 ARSYYRCTNPRCSAKKQVERSSDDPETFIITYEGLHLH 120 6***********************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 1.8E-8 | 81 | 122 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.2E-13 | 83 | 120 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 4.5E-15 | 83 | 120 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-13 | 83 | 120 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.571 | 84 | 123 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MEETIGSWSN GSEEELVREL LDDESPLFVL QEEATEFKNS PPNEEALLNR FNPQVYSGPT 60 IDDIENALSV TTRRIQSDEL SPARSYYRCT NPRCSAKKQV ERSSDDPETF IITYEGLHLH 120 FAYPFFFVGQ PQLGNPPIKK TKKNISGPEA QNHEPTQTLE AHESLSDVNP EMGPGSVMDH 180 HNHREVGEEE RSSQGLIQDV VPLMILNPSS NTSSNSSCSS YRSPPTSPSS LSWPLNFSTS 240 YFDVGINSSI M |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015896959.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024934539.1 | 1e-155 | probable WRKY transcription factor 49 | ||||
TrEMBL | A0A2P5AQ61 | 1e-70 | A0A2P5AQ61_PARAD; WRKY domain containing protein | ||||
STRING | XP_008240747.1 | 1e-66 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7118 | 34 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 1e-22 | WRKY DNA-binding protein 49 |