PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015895662.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | G2-like | ||||||||
Protein Properties | Length: 382aa MW: 41832.2 Da PI: 7.7268 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.1 | 7.1e-32 | 209 | 264 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_015895662.1 209 KQRRNWSPELHRRFLNALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 264 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.384 | 206 | 266 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.14E-18 | 207 | 267 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.5E-28 | 207 | 267 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.3E-27 | 209 | 264 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.3E-8 | 211 | 262 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence Send to blast |
MQGSGLGFRE YVEALEEERR KIQVFQRELP LCLELVTQAI ERCRQQLSGT TTEYLHGQSE 60 CSGQTSSEGH VFEEFIPMKR ISCSDNEEED DGEEQQSMKP KKNSDKDNDN NNNIGDKKKS 120 DWLRSVQLWN PTPDPPHKEE LPRKASVVEV KRNGGAFQPF QREKSVAKAN GSVGKATPSA 180 PETSSTAEPA AGGGSGGNTK KEDKDGQRKQ RRNWSPELHR RFLNALQQLG GSHAATPKQI 240 RELMKVDGLT NDEVKSHLQK YRLHTRRPST AIHNNGNAQT PQIVLVGGIW MPPPEYAAVA 300 ATTTAPGETS TVAATNGIYA PVAAPPPTAV TQPTTSIIKR PQLKQSESSH SEERISHSDG 360 HAHSNSPATS SSTHTTTTSS LF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 3e-13 | 209 | 262 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-13 | 209 | 262 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-13 | 209 | 262 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-13 | 209 | 262 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00160 | DAP | Transfer from AT1G25550 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015895662.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015895662.1 | 0.0 | transcription factor HHO3-like | ||||
Swissprot | Q9FPE8 | 1e-104 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A251R5K5 | 1e-173 | A0A251R5K5_PRUPE; Uncharacterized protein | ||||
STRING | EMJ24423 | 1e-174 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3918 | 33 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 2e-92 | G2-like family protein |
Publications ? help Back to Top | |||
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