PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015892487.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family TALE
Protein Properties Length: 683aa    MW: 74545.5 Da    PI: 6.2105
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015892487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.32.9e-094244611954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +++  LA+++gLt +qV++WF N R +
  XP_015892487.1 424 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 461
                     664459******************************88 PP
2BELL127.54.7e-41286357172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     e+q+lq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+a+ g+g+akpYt+lAl++iSrhFrcL+dai++qi
  XP_015892487.1 286 EKQDLQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDAISGCGAAKPYTALALQTISRHFRCLRDAITGQI 357
                     6899*******************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.2E-63207355IPR006563POX domain
PfamPF075269.1E-51213354IPR006563POX domain
PROSITE profilePS5007112.163402465IPR001356Homeobox domain
CDDcd000864.49E-13405466No hitNo description
SMARTSM003891.0E-9405469IPR001356Homeobox domain
SuperFamilySSF466892.57E-17406472IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.2E-29408471IPR009057Homeodomain-like
PfamPF059204.6E-18422461IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 683 aa     Download sequence    Send to blast
MATYYTSSNN QRDTAPILYL REPLPSSYPE TSVLPNNMMM YMNSGSYSDE LNGNSQQQNS  60
CIEMPPMGAS DSSPQQQDIL SNLGGSRIGQ HDFTEWRDGR NELVVAQGIS GAPSILHGGP  120
NLQGQGLSLS LGTQIPSGIQ MPSISYRNPN LGFSSFLSSN PSISGEGGCR NGSSRDEQSR  180
NVEYLTPGFP GGNQDLNKGE LSPYGMSSIA RTIPNSKYLK AAQQLLDEVV NVRKALKQND  240
NENRTKDLKD GEDGSKNEST LPSGSAVSSN PQESASTSPY ELSHAEKQDL QNKLTKLLSM  300
LDEVDRRYKQ YYHQMQIVVS SFDAISGCGA AKPYTALALQ TISRHFRCLR DAITGQIRAT  360
RKSLGEQDSS GNVKGVGIAR LRFVDQQLRQ QRALQHLGMM PQHAWRPQRG LPESSVSILR  420
AWLFEHFLHP YPKDSDKIML ARQTGLTRSQ VSNWFINARV RLWKPMVEEM YKEEAGDAEM  480
DSNSSSENAA KATKGDIRTS EDRGEDLQQS ASSTGTERCS TGRFMDSKSA AHVTDIEMAG  540
SNGSATFQSG THREAETQYS LVKRRDGQRP GMDDCSLFSD GMVQSDGSSE RFMAAAAAYH  600
MSELGRFGSG SGVSLTLGLQ HCDGGSIPMS SGNHQGFVAM RGDDIYNAAA SSVGAETPDF  660
ECLNSGNQQA RFSSSHLLHD FVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A6e-17411468158Homeobox protein Meis1
4xrs_B6e-17411468158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015892487.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015892487.10.0BEL1-like homeodomain protein 6
TrEMBLA0A2P5DVS50.0A0A2P5DVS5_TREOI; Homeodomain transcription factor
STRINGXP_010107836.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21463179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-129BEL1-like homeodomain 6