PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015872670.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 281aa    MW: 31667.3 Da    PI: 7.8163
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015872670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.77.6e-21229269140
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkver 40 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v +
  XP_015872670.1 229 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVHT 269
                     58***************************99********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-20214269IPR003657WRKY domain
SuperFamilySSF1182901.57E-18222270IPR003657WRKY domain
PROSITE profilePS5081118.797224267IPR003657WRKY domain
SMARTSM007745.8E-16229281IPR003657WRKY domain
PfamPF031064.9E-18230269IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MMFKQVPSNT TGIESSSMER DSMVSSSSRK EQDEQLVSTR AEMGEVREEN QRLKMYLDRI  60
MKDYQTLQMQ FYGIVQHEAK KSTTTSEAIS KNHQQETDQE AELISLRLGS FSSITNYYPK  120
KDEKNKASSD HGKETSSTTD HQVEEGLALG LDCKFEPSKS SGATDQGPLS NPSPASSFEE  180
TNKEEARETW PPPNKSLTAK RSTDDEVSQQ SPAKKARVSV RARCDTPTMN DGCQWRKYGQ  240
KIAKGNPCPR AYYRCTVAPS CPVRKQVHTI IMSQLDIRIL F
Functional Description ? help Back to Top
Source Description
UniProtIn association with WRKY72A, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015872670.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015872670.10.0probable WRKY transcription factor 72
SwissprotD8VNC62e-75WK72B_SOLLC; WRKY transcription factor 72B
TrEMBLA0A2P5F7C81e-105A0A2P5F7C8_TREOI; WRKY domain containing protein
STRINGXP_008239828.17e-99(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-55WRKY DNA-binding protein 72
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]