PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015870463.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 587aa    MW: 63426.8 Da    PI: 8.7973
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015870463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-30237296159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  XP_015870463.1 237 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILTTTYEGTHNHP 296
                     58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-30230298IPR003657WRKY domain
PROSITE profilePS5081128.024232298IPR003657WRKY domain
SuperFamilySSF1182906.67E-27233298IPR003657WRKY domain
SMARTSM007743.0E-36237297IPR003657WRKY domain
PfamPF031067.7E-27238296IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MMFKQVPSNT TGIESSSMER DSMVSSSSRK EQDEQLVSTR AEMGEVREEN QRLKMYLDRI  60
MKDYQTLQMQ FYGIVQHEAK KSTTTSEAIS KNHQQETDQE AELISLRLGS FSSITNYYPK  120
KDEKNKASSD HGKETSSTTD HQVEEGLALG LDCKFEPSKS SGATDQGPLS NPSPASSFEE  180
TNKEEARETW PPPNKSLTAK RSTDDEVSQQ SPAKKARVSV RARCDTPTAK NFNKKIMNDG  240
CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP VRKQVQRCAD DMSILTTTYE GTHNHPLPIS  300
ATAMASTTSA AASMLLSAST TSSSRSVLNP LSATTTPADL HGLNFYLSGN SNLKQFYLPN  360
APLSSTSHPT ITLDLTSNPS SSSLFNKFSP NYPPLYSSST SLNFGSSESN LMSWSNNGFL  420
SYGTSNSQPY NNSRTQIGNL SLGRQSGTST STMQQQNNVF QNFLQKNGNN AVPHNPRPQG  480
SILLPQQALP DSLAAATKAI TADPSFQSAL AAALSTIIGT QGNHGGGGGG SYVQTTKGNN  540
GCASSYLNRT TSNLQPGNSM FASSSSLPFS NSKSGSASSG DHREQTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-192362981374WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015870463.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8275822e-73KT827582.1 Manihot esculenta WRKY transcription factor 7 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015870463.10.0probable WRKY transcription factor 61
TrEMBLA0A061G4201e-176A0A061G420_THECC; WRKY DNA-binding protein 72, putative
STRINGEOY217541e-176(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-79WRKY DNA-binding protein 72