PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013901909.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
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Family | bZIP | ||||||||
Protein Properties | Length: 217aa MW: 23287.1 Da PI: 6.0322 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21 | 7.3e-07 | 147 | 199 | 10 | 62 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++kNR+A+rr+R++ ka i e ++k + + + +++k e++ l++e l+++ XP_013901909.1 147 REKNRLAQRRFREKQKATISEQKDKLDHMARQLDDYKREVQLLREENNILRAK 199 89********************************************9888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0079 | 135 | 202 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.1E-7 | 146 | 201 | No hit | No description |
SuperFamily | SSF57959 | 8.13E-7 | 147 | 200 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 147 | 160 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14686 | 2.06E-7 | 147 | 193 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MAGGALAGMA ALDALTGGHA ALAELNAQAA LLAGLPSNLQ QMVPPIAPLQ GIQTESQTID 60 ALQQAILATI NTSGSGMPNL FAALHTLGAE QGAPAPPQPS APPPQPQSQL EEETSEQGGA 120 SGSRKARRRA SDVEEEDDGN RTLANTREKN RLAQRRFREK QKATISEQKD KLDHMARQLD 180 DYKREVQLLR EENNILRAKL EGRATLHQHM ITDPPMG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013901909.1 | 1e-154 | hypothetical protein MNEG_5066 | ||||
TrEMBL | A0A0D2MIM5 | 1e-153 | A0A0D2MIM5_9CHLO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP7936 | 4 | 5 |
Link Out ? help Back to Top | |
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Entrez Gene | 25737943 |
Publications ? help Back to Top | |||
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