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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_013622404.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
bZIP |
Protein Properties |
Length: 421aa MW: 46672.6 Da PI: 6.9688 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_013622404.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.3 | 9.4e-10 | 276 | 331 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
kr +r NR +A rs +RK +i eLe kv++L++e ++L + l+ + l+
XP_013622404.1 276 KRVKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQFTLLQRDMMGLT 331
899**************************************999888877666555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 421 aa
Download sequence Send
to blast |
MGDTDTDMIH RLHSPFGKQP KQLQLNPKPP TSPYSQIQNL NPVGATTSHS RSMSQPSSFF 60 SFDSLPPLSP SPFNNNNNNN PSSSLLPPSP FTRCNSDSSR VVLLPPRKSH RRSNSDISGG 120 ESADWSTKTT PPFVKKESGE REDMDDLFSA YMNLENIDDM ESSRASGTKT NGSDDTEGES 180 SSVNYESGGD RNNSLKRRAG AGGGDIAPTS RHYRSVSVDD SCFMEKMSFG EDSLKPPPTN 240 SVNGGIEFKS GEFNAAEMKK IMANDKLAEM AVSDPKRVKR ILANRQSAAR SKERKMRYIV 300 ELEHKVQTLQ TEATTLSAQF TLLQRDMMGL TNHNNELKFR LQAMEQQAQL RDALSEALNG 360 EVQRLKLAIG ETSHNESDRS KMQSLNAEMF QQLNISQLTQ QRQSQQNQNG TLSAKPESNE 420 L
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY080839 | 1e-163 | AY080839.1 Arabidopsis thaliana unknown protein (At4g38900) mRNA, complete cds. |
GenBank | AY150435 | 1e-163 | AY150435.1 Arabidopsis thaliana unknown protein (At4g38900) mRNA, complete cds. |