PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011396441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
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Family | bZIP | ||||||||
Protein Properties | Length: 292aa MW: 30438.2 Da PI: 9.68 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.5 | 1.4e-13 | 241 | 284 | 6 | 49 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r++kNRe+A rsR+R++++++ Le kv+eL++ N+ L++++ XP_011396441.1 241 SSKRAIKNRESAARSRARRQEYTQTLEAKVAELQEANRLLREQV 284 579**********************************9999865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0045 | 236 | 290 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.944 | 238 | 284 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.9E-11 | 240 | 284 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.40E-17 | 240 | 284 | No hit | No description |
SuperFamily | SSF57959 | 3.44E-9 | 241 | 286 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.1E-11 | 242 | 285 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 243 | 258 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MQRDAWTDPI SASLETLPGG ESLPADLGKL LQQLVQASAA EGAGTDSNAA DELRDSLSSL 60 GISIEALQRH NPGSFGSKTL DDVWEMMAPQ RLDGDTSDAR LSQVGAALAI GDRKLLDQAA 120 QLLPELSSLV PSTLPTPASL QMPSHLPPHA GEATPHNPAA AAGVRAGLPS RAASPSLAGF 180 RYRGVSLGPP GGPGSLTPPA HSLGLEVRPG AHPVNASPFQ LSSAPGPRAA SPLSRPEGAR 240 SSKRAIKNRE SAARSRARRQ EYTQTLEAKV AELQEANRLL REQVGVKRAR SL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011396441.1 | 0.0 | Protein FD | ||||
TrEMBL | A0A087SCW3 | 0.0 | A0A087SCW3_AUXPR; Protein FD | ||||
STRING | A0A087SCW3 | 0.0 | (Auxenochlorella protothecoides) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP9391 | 4 | 4 |
Link Out ? help Back to Top | |
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Entrez Gene | 23614217 |