PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011092560.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 288aa    MW: 31578.2 Da    PI: 5.9811
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011092560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87e-1275118855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f+ L +l+P++   p  + +K++i+ +Av YIk+L+
  XP_011092560.1  75 TERERRKKMRNMFASLHSLIPHL---P-ARADKSTIVDEAVLYIKKLE 118
                     7*********************6...3.89***************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-1465130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.40867117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.52E-1172122No hitNo description
Gene3DG3DSA:4.10.280.107.5E-1472131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-975118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-775123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00636212248No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MLVAMAEGLW DDQSWSFPIL EGDESGGKML MDTGNSEAAA KDVEAPPPAA AKGKKRSQPG  60
GGDGESDDHE LHIWTERERR KKMRNMFASL HSLIPHLPAR ADKSTIVDEA VLYIKKLELT  120
LSELERQKAQ ILKGKSSANP TVCDLPIITQ QNLAIQSREA FLAEQGSTPV AVANPSSLNP  180
LFPAGPELPA ATFRTWTSPN VILNVCGWDA HISISSPKKP GLFTPIFFVL EKYKLEVVSA  240
QVSSARDRRM CMIHARANGG AEQFPETMCL VEEVFKQAAV EIMLWVNS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011092560.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092560.10.0transcription factor bHLH95-like
TrEMBLA0A2G9GTZ41e-108A0A2G9GTZ4_9LAMI; Uncharacterized protein
STRINGXP_009800782.19e-87(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-49bHLH family protein