PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090494.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 363aa    MW: 39982.9 Da    PI: 6.9292
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12297342655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR +i +++ +L+el+P+      k  + a++L +Av+YIk+Lq
  XP_011090494.1 297 SIAERVRRTKISERMRKLQELVPNM----EKQTNTADMLDLAVDYIKDLQ 342
                     689*********************7....467*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.18291341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-17294357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.14E-13295346No hitNo description
Gene3DG3DSA:4.10.280.101.0E-15296352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-9297342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.8E-14297347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MSRFQQQQQQ QFPQNMQTGG AGLTRYRSAP SSYFSSFLNA TASDGGFGAE DFEQLFSPNV  60
TTLQSQRKSQ PQQQLRRQQS NDFSSVMYQN PNSDAANSAT GSSYTRQLGD TVLNRGAAPV  120
KMEGGGDGSS NLIRHSSSPA GLFDDINIEN EFGAMRDYGN FGAGSLANAE ASFSSTSRFK  180
TETRFSSRNS SITPGDGQFD QDRGNDGDYI PGFPMNPWDL SDDFLKGLVD NDSKTFPKAN  240
DSDDQNNEGG NRSTTPLSRH LSLPTSSAEL SAMEKLLQDS VPCKIRAKRG CATHPRSIAE  300
RVRRTKISER MRKLQELVPN MEKQTNTADM LDLAVDYIKD LQRQVQTLSD RHVRCSCSPG  360
TKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090494.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0733672e-35KJ073367.1 Sesamum indicum clone TilSSR_44568 microsatellite Sesame_44568 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090494.10.0transcription factor bHLH130-like
TrEMBLA0A2G9GI901e-124A0A2G9GI90_9LAMI; Uncharacterized protein
STRINGMigut.D00568.1.p1e-110(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-61bHLH family protein