PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090117.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 429aa    MW: 49097.2 Da    PI: 9.1592
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.11.5e-44451712128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     ppGf+F P+d el+ eyLk+k+ + +++l   i ev++y+ +P++L     + ++  wyfF++rd+ky++g+r+nra+ +gyWkatg dk+v++ 
  XP_011090117.1  45 PPGFHFVPSDAELILEYLKRKILNLSIPL-PEICEVNLYRNHPKELAaLYPQLGQAGWYFFTPRDRKYRNGTRPNRAVGNGYWKATGADKPVITC 138
                     9****************************.56**************8445556889*************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g++vg k++Lvfy+g+ p+gekt+W+m+eyr+
  XP_011090117.1 139 DGSVVGSKRVLVFYEGKPPNGEKTNWIMNEYRV 171
                     *******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-5439198IPR003441NAC domain
PROSITE profilePS5100551.66344198IPR003441NAC domain
PfamPF023654.7E-2345171IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MTIFPPFGAY QQNPPAVTAV ALEEIPMEIS ASEKKIQSYG REHYPPGFHF VPSDAELILE  60
YLKRKILNLS IPLPEICEVN LYRNHPKELA ALYPQLGQAG WYFFTPRDRK YRNGTRPNRA  120
VGNGYWKATG ADKPVITCDG SVVGSKRVLV FYEGKPPNGE KTNWIMNEYR VIDQPPRHKR  180
DANDMRLDDW VLCRIHKKLA SRKKKKDPQR RNKQQVKLAR RNKKKVPRRR CNKQQHDQLL  240
VDNSKNLAML SIHDNVATSE AQFVDNHGKH AAAPTAGDTA VRDDPPDRSL EDLFEAYLSK  300
MDDDHFDANF GLNCGPETGC VYRSPEFGVL DYLFRTRSSQ EEHDWWFPDH PQQDAHELWG  360
TGNPVNFQQQ VSAPYHVPPS SNGAGSSTDS IIKSEGPRFD DAAIFNNVPN DHYQTVHKKT  420
RRIVQQRSN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-494520418171NO APICAL MERISTEM PROTEIN
1ut4_B1e-494520418171NO APICAL MERISTEM PROTEIN
1ut7_A1e-494520418171NO APICAL MERISTEM PROTEIN
1ut7_B1e-494520418171NO APICAL MERISTEM PROTEIN
4dul_A1e-494520418171NAC domain-containing protein 19
4dul_B1e-494520418171NAC domain-containing protein 19
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201206RKKKKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090117.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090117.10.0NAC domain-containing protein 35-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.16e-57NAC domain containing protein 32