PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011076875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26526.9 Da PI: 8.3989 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.3 | 2.5e-15 | 85 | 133 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 +++ GVr++k +g++++eIrdp kr++lg+f t+e+A +a+ a +k++ XP_011076875.1 85 KKFVGVRRRK-SGKYASEIRDP-----IikKRVWLGTFATPEQASRAYLAKKKEI 133 589****999.7*********8.....336*********************9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 6.19E-19 | 85 | 126 | No hit | No description |
SMART | SM00380 | 1.0E-14 | 86 | 150 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.2E-17 | 86 | 128 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.066 | 86 | 144 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.9E-8 | 86 | 134 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-13 | 86 | 133 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 8.1E-6 | 87 | 98 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.1E-6 | 109 | 125 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MNQKTMEKLT PTPTIKMVRI LYSDPDATES SSDEEVDTTQ KKGKKKKTLE IVLHAVNKSS 60 GSASEVSSEK KLVGSEKSPL PAVRKKFVGV RRRKSGKYAS EIRDPIIKKR VWLGTFATPE 120 QASRAYLAKK KEIDEKLKGK QGFDTVPTEK PSDKDSPFSV LENETSDLTN ETSQADAVKD 180 QEGLGENKVS ENQEAKFGFL NGVQVVDNNG FLVGEFSKID DLSLPSTEDG VFCPDMSFGA 240 K |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011076875.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076875.2 | 1e-170 | ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A2G9GIW9 | 2e-68 | A0A2G9GIW9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.E00336.1.p | 9e-54 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 1e-09 | ERF domain protein 11 |