PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075620.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 257aa    MW: 29821.6 Da    PI: 6.5186
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.86.2e-1675127155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR+r+Ns ++ Lr+llP+ +   + +Kls  +++ ++v+YI +Lq
  XP_011075620.1  75 KKLNHNASERDRRKRMNSLYSSLRSLLPPeD---QTRKLSIPATVSRVVKYIPELQ 127
                     6789*************************66...9999***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.22474126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.19E-1574145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-1375150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.26E-575131No hitNo description
PfamPF000104.8E-1375127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-1180132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MLDISPQFCS MGWLLEEEDP MFNHDQENGL NYLSRERPET SAGSIDLHSP CKNGEFNNEG  60
FHEGDDHESN NKMAKKLNHN ASERDRRKRM NSLYSSLRSL LPPEDQTRKL SIPATVSRVV  120
KYIPELQREV ERLTEKKEKL MMSKKICRQE KYTSMKKQQR HRKATQSSAI TQISDREIIV  180
QSSAEKGNYS SFCEAVMRLE VQEGFLLLNA SSFQSLDATT LFYTLHLQAQ ENQVIDTEML  240
KEKVWPFHEK GEEITLT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011075620.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075620.10.0transcription factor ORG2
TrEMBLA0A2G9HLC31e-88A0A2G9HLC3_9LAMI; Uncharacterized protein
STRINGMigut.J01664.1.p8e-75(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-37bHLH family protein