PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011072844.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 189aa MW: 22397.2 Da PI: 5.4482 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 89.3 | 7e-28 | 22 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdk 90 +p+G rF Ptdeel+v yL+kkv +l++ +vi+e+d y+ P+dL +++ ++e+ewyfF++ d+ + + +k r+++ gyWk+ gk++ XP_011072844.1 22 MPVGWRFAPTDEELIVSYLTKKVFVGSLPA-RVIEEIDadeFYNKRPKDLVENL-SGEREWYFFINGDQYFHGKMEKDRKVAdgIGYWKSIGKEN 114 699********************9999888.66777654449999*****7554.6789********99888888888855424799******** PP NAM 91 evlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128 ++ +++g++ k +++ +++++k ++t+W m+e+rl XP_011072844.1 115 PIRDAEGNAFAFKILYTYFsanpTQKNSKQKRTHWRMEEFRL 156 ****999999999888888777767888889*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.02E-31 | 20 | 178 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 32.272 | 22 | 180 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.2E-16 | 23 | 156 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
MPFGDGILQE LPDAKDGILQ EMPVGWRFAP TDEELIVSYL TKKVFVGSLP ARVIEEIDAD 60 EFYNKRPKDL VENLSGEREW YFFINGDQYF HGKMEKDRKV ADGIGYWKSI GKENPIRDAE 120 GNAFAFKILY TYFSANPTQK NSKQKRTHWR MEEFRLLRRS TKNEENFHME EWVVARITRG 180 EDYNESRFY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-18 | 22 | 177 | 15 | 165 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011072844.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011072844.1 | 1e-139 | NAC transcription factor 32 | ||||
TrEMBL | A0A2G9G8B6 | 6e-61 | A0A2G9G8B6_9LAMI; Uncharacterized protein | ||||
STRING | cassava4.1_022395m | 3e-42 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16166 | 6 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 3e-26 | NAC domain containing protein 32 |