PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072329.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Trihelix
Protein Properties Length: 374aa    MW: 42457.1 Da    PI: 4.3512
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.88.8e-16140225287
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     Wt++e+  L++a  ++  + ++++l+   W+ev++k+ +e ++er+ +qC+++++ l+k+ykk+k   ++    s s+++yf++l+a
  XP_011072329.1 140 WTEHETFILLDAWGDRFLKQGKKSLRSEEWQEVAEKVsQESKIERTDTQCRNRLDTLKKKYKKEKMKLGDS-GSSASNWVYFKKLDA 225
                     *************************************88999***************************96.66677*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.0E-5139204IPR009057Homeodomain-like
PfamPF138372.9E-22139226No hitNo description
PROSITE profilePS500906.33140197IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MMDEEDGKGY PPNSYRVNRQ KFPVENVNYP RNVGNSYVED DDNDEEEEED IDNAEDNEDD  60
DDDDDDGGNG VQRIGKDDYE YGDDGDDDDD FGDLERHPKK RKLKTLLSSY EFAPRVPAPS  120
SASASVPKTS YGGRNPLTDW TEHETFILLD AWGDRFLKQG KKSLRSEEWQ EVAEKVSQES  180
KIERTDTQCR NRLDTLKKKY KKEKMKLGDS GSSASNWVYF KKLDALLSSL PQQAGLSCGV  240
DSGEYVFMNP KVYLNRSNGL DEMRDSPENS ASAGGGEDES EGLPPQKTKN GGVRGNAASF  300
KLLADSIQKF SEIYQKIENS KRQQMAELEK MRMDFHRDLE FQKRQILERA QAEIEKIRRG  360
EDDDNEVSAE NVSG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072329.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0569333e-56KJ056933.1 Sesamum indicum clone TilSSR_28134 microsatellite Sesame_28134 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072329.10.0trihelix transcription factor ASIL1-like
RefseqXP_011072330.10.0trihelix transcription factor ASIL1-like
TrEMBLA0A1U7W4A71e-159A0A1U7W4A7_NICSY; uncharacterized protein LOC104223665
STRINGXP_009609888.11e-161(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72302431
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.13e-72Trihelix family protein