PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010943974.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 383aa MW: 41312.1 Da PI: 8.2066

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010943974.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.1e-39	91	151	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ XP_010943974.1 91 QQAALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 151 57889*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-31	89	149	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.2E-33	93	149	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.525	95	149	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	97	133	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence Send to blast
MLCNGERLGN PLTHEWPQSM GESLLIPGNN NSNSNSNNNN NSNNNNNAPT ASSSSNSTSA 60 STNNNNKNNK MIHAAAPPPA TRVIDRPAQE QQAALKCPRC DSSNTKFCYY NNYSLSQPRH 120 FCKACKRYWT RGGTLRNVPV GGGCRKNKRV KKPASAVVSD PKPPPLMPPT NSIIPPISSL 180 PKPTPHLDPS LFYSLPAARS NPPPPSSSDV GLAFPGLHPR FDPPSVPNSI SLPCTAFDLQ 240 HPQLNSLGLG FPSGQRDDEF NLDHLSVTND YPLFGSTAAS LLVSSLKEPK KVEDYRALMH 300 REDLQAPPLA ANGNLDAIKE VKLEGESNAI NSNRIDWQIP YENSFDAIGS APLPGDSSLL 360 YWNAAIGAWP DSANYGSSIA PLI

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence Send to blast

MLCNGERLGN PLTHEWPQSM GESLLIPGNN NSNSNSNNNN NSNNNNNAPT ASSSSNSTSA  60
STNNNNKNNK MIHAAAPPPA TRVIDRPAQE QQAALKCPRC DSSNTKFCYY NNYSLSQPRH  120
FCKACKRYWT RGGTLRNVPV GGGCRKNKRV KKPASAVVSD PKPPPLMPPT NSIIPPISSL  180
PKPTPHLDPS LFYSLPAARS NPPPPSSSDV GLAFPGLHPR FDPPSVPNSI SLPCTAFDLQ  240
HPQLNSLGLG FPSGQRDDEF NLDHLSVTND YPLFGSTAAS LLVSSLKEPK KVEDYRALMH  300
REDLQAPPLA ANGNLDAIKE VKLEGESNAI NSNRIDWQIP YENSFDAIGS APLPGDSSLL  360
YWNAAIGAWP DSANYGSSIA PLI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010943974.1	0.0	dof zinc finger protein DOF1.4
TrEMBL	A0A3Q0IE02	0.0	A0A3Q0IE02_PHODC; dof zinc finger protein DOF1.4-like
STRING	XP_008806466.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8895	30	41

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	9e-36	TARGET OF MONOPTEROS 6