PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010941463.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | GeBP | ||||||||
Protein Properties | Length: 406aa MW: 44335.5 Da PI: 5.3578 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 115.1 | 4.2e-36 | 130 | 227 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 fq+lw++ Dei++LqG+++f++++g+ ++++d+ fy+++k++++++++k+qlveK+rrLKkK++++v++++ gke +f+++hd+ +fe+++k XP_010941463.1 130 FQKLWTDADEITILQGFLEFTSQRGTthaNYQHDTGPFYDQIKGRLQLDFNKNQLVEKLRRLKKKYRNMVSRIAAGKESVFKSPHDKATFEIARK 224 9************************98867777************************************************************** PP DUF573 95 iWg 97 iW XP_010941463.1 225 IWS 227 **7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.7E-33 | 130 | 227 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence Send to blast |
MMASTAEDDE HDAAVYDEDD SDSDSDSDDG VDSEEYDDDV VDGHSAALPP PPVPAAAADQ 60 QILRSSSSSV VPNPNPNPSA SSPIPQNGAG GAGWGVAFVA SPDGKRQRIS PPVDERKPPA 120 VAYDESRRIF QKLWTDADEI TILQGFLEFT SQRGTTHANY QHDTGPFYDQ IKGRLQLDFN 180 KNQLVEKLRR LKKKYRNMVS RIAAGKESVF KSPHDKATFE IARKIWSPSF KRTRNRDSCN 240 APNCQLQERS NLVPVEVAED VLLSSDQMMS RSRRKRSEGE VAREMQLAVA TPVVSVPVVQ 300 QTPRSSAPIP NASLIEQTVK SCLSPLFKEL LQHAIGGPCA PGGAGDGGAA PNPLLLSGAG 360 GSGAVQVDEK WRKQQILELE VYLKRVELVH EQVKSKLEEL RSMGRS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010941463.1 | 0.0 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2H3ZI45 | 0.0 | A0A2H3ZI45_PHODC; probable transcription factor At3g04930 | ||||
STRING | XP_008777017.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 9e-57 | DNA-binding storekeeper protein-related transcriptional regulator |