PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010929446.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 381aa MW: 40868.7 Da PI: 7.2476

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010929446.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.3	2e-39	90	149	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ XP_010929446.1 90 QAALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 149 7789*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-30	87	147	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.2E-33	91	147	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.525	93	147	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	95	131	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence Send to blast
MLCDGEKLRI PSTNERPQVR SMSTSPQNMG EMLLIPGNNN SENNNTDTNN NKNASTATSN 60 SSTSTNSNMI HAAAAPSAAR VMDKPAQDHQ AALKCPRCDS SNTKFCYYNN YSLSQPRHFC 120 KACKRYWTRG GTLRNVPVGG GCRKNKRVKK PTSTAASDPL PSALMPPTNS VPPISLPNPA 180 SHLDSPMNPL FYSLPTASSS SGLAFSGLRA PSVPHGISIP CTGFDLPQPQ LNSLGLGFPS 240 SQSQSQRDDE FHLSQLQTSA SVMNDHPLFG STAASLLLSS LRQPKKLEDY QALMPYEELH 300 AASAEAIGNL GVIKEVKLEG DSNAIDHNRI EWPIPLENSF DAIIPAASTS LAGDSSFLYW 360 NSAIGAWPDS AHCESSVAPL I

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence Send to blast

MLCDGEKLRI PSTNERPQVR SMSTSPQNMG EMLLIPGNNN SENNNTDTNN NKNASTATSN  60
SSTSTNSNMI HAAAAPSAAR VMDKPAQDHQ AALKCPRCDS SNTKFCYYNN YSLSQPRHFC  120
KACKRYWTRG GTLRNVPVGG GCRKNKRVKK PTSTAASDPL PSALMPPTNS VPPISLPNPA  180
SHLDSPMNPL FYSLPTASSS SGLAFSGLRA PSVPHGISIP CTGFDLPQPQ LNSLGLGFPS  240
SQSQSQRDDE FHLSQLQTSA SVMNDHPLFG STAASLLLSS LRQPKKLEDY QALMPYEELH  300
AASAEAIGNL GVIKEVKLEG DSNAIDHNRI EWPIPLENSF DAIIPAASTS LAGDSSFLYW  360
NSAIGAWPDS AHCESSVAPL I

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010929446.1	0.0	dof zinc finger protein DOF1.4 isoform X1
Refseq	XP_029123042.1	0.0	dof zinc finger protein DOF1.4 isoform X1
TrEMBL	A0A2H3X7M2	0.0	A0A2H3X7M2_PHODC; dof zinc finger protein DOF1.4-like
STRING	XP_008779534.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8895	30	41

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	2e-36	Dof family protein