PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925633.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 530aa    MW: 59314.4 Da    PI: 7.5367
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925633.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.11.5e-31115168255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +F++ave+LGG+e+AtPk +l++m+vkgL+++hvkSHLQ+YR+
  XP_010925633.1 115 PRLRWTPDLHLSFIHAVERLGGQERATPKLVLQMMNVKGLSIAHVKSHLQMYRS 168
                     8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.659111171IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.0E-29111169IPR009057Homeodomain-like
SuperFamilySSF466894.3E-14113169IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-22115170IPR006447Myb domain, plants
PfamPF002494.8E-9116167IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MGAEKEKKVL EICEYEEKSE RSVGSFQSPS LKKRAPTLDL NEDVVAEGSE EGEVEGGDEE  60
EDDGGSTTEV AGGGSSSNNS STNNCSNKDK ENSGAAEGSG ERVPTVRQYI RSKMPRLRWT  120
PDLHLSFIHA VERLGGQERA TPKLVLQMMN VKGLSIAHVK SHLQMYRSKK LDDSGQEKSV  180
MSSGMSPMDM HLRRGGRLHE MIYQRTGAHQ SFRMESGGFF PSRGIHDDDR RLYNLLHRLQ  240
PQQPFDLKSC NFGYQEWAFN QQVAATASSM KNHSPAKGLI HDMIYRKHGK PSTSHLFDVR  300
DTITGHGNSR PSHQYLEERT WQPGEMVGNQ RLECHGLGSF DLIGSSSCPL SKAVRTNPIS  360
TDSTLGWKAS SNYYYNSNNN NNNKIQFNSH DPVVFNGSLE PRFENPFQLA LQKKHMMSKP  420
MTKFEEMFAK GETHNTEVKR MRMTVESDWT PNLQLSLSPN LANDKGTRNK GIEAEEKVDS  480
MLSLSLSSPI SMQREGTTKP EIQFLQKISS NKAAQGLSTL DLTMSIKTLE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-17116170357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-17116170357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-17116170357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-17116170357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925633.10.0uncharacterized protein LOC105048124 isoform X2
TrEMBLA0A3Q0I7320.0A0A3Q0I732_PHODC; uncharacterized protein LOC103701201 isoform X2
STRINGXP_008790063.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-36G2-like family protein