PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925429.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 532aa    MW: 58905.2 Da    PI: 7.4256
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925429.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.5e-10352396554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h + Er+RR+++N++f+ Lr llP+      +K +Ka++L  + e+++ L
  XP_010925429.1 352 HMISERKRREKLNESFHALRMLLPPG-----TKKDKASVLSNTREFLNTL 396
                     7789********************97.....79**********9999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.545347396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.86E-11347401No hitNo description
SuperFamilySSF474592.49E-15349417IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-8352396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-13352415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-11353402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MFVYLPVETA PPPIQVCYPL LNFLFLPSFP SLKPSILFHH LILGGTSISH LASVDGWHHE  60
DDHTHRSCSP GSVSRRLFKA YRESFFSIDS GCVPGSAYKG GLAYIELGES ELMISACVQI  120
QRQFYQEAGI KIAVFMGCGS GEIELGMTTL SNGQMRTRMH IQQVFSEDYI QHSLLGDPFP  180
APDQGRPSSS SSSSFRSLSV GSPEYSSLLL TKAGAHHLMS EVIGEQALVV PPHQMSIMQA  240
YGGRHPNVLR PPNPASDDAV MTRAMLAAIS SPSTSSSPPS FLYPSPCQRR RNPTVGPFEP  300
YNPALAPKIG SNPAVHGQKM MKTAISILRR IYEVRYENRV QEARPTSNQL LHMISERKRR  360
EKLNESFHAL RMLLPPGTKK DKASVLSNTR EFLNTLKAQI SELEERNRML EMQLQPPDET  420
KEVGDSTETI EIQITRASES TSQAQRINLR VTVRVECNMM DLVLNILECL KEMGNISLVS  480
VDASTGSPRV NTFARSNFTL QVQASDWDEE SFKEAVTRAV DGVVARPATT TP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1355360ERKRRE
2356361RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925429.10.0putative transcription factor bHLH041 isoform X1
TrEMBLA0A2H3Y4B40.0A0A2H3Y4B4_PHODC; putative transcription factor bHLH041
STRINGXP_008782582.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39773367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-46bHLH family protein