PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010924607.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 358aa MW: 40864.7 Da PI: 10.0404

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010924607.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	28.3	3.8e-09	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v gL+++hvkSHLQ+YR+ XP_010924607.1 1 MNVRGLSIAHVKSHLQMYRS 20 9******************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.1E-7	1	21	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence Send to blast
MNVRGLSIAH VKSHLQMYRS KKLDNSKRGR NVFPSSVISL ADANRPRDHI SNLFYQRIFS 60 SQPLRMESGG PFSQRNDLEE YRCCHLLQRS QAQQSNDLKN FNSGRHQDWA FNQQMTSRIN 120 PIHDQGQARG LLHDLNLRKD GQPSTSHLFD VRDAITGNLN ARATHQFLWE RRWRSSDMAM 180 SQGTNTRGVI GSYDCIGRNS RLVPSNSTLK RNTSSTSFVD YCESKTNQIE PNSREPTVIS 240 DSIKPHFETP HWLKLQKNPA YQSKFKFEDI IEKSETPTAD MKKLIVARER DWTPNLQLSL 300 NNSHDGAGGR KGLEAGKVDN FLSLSLAHPM SENQVESFKV EKDAAKTEIQ FFPTESSK

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence Send to blast

MNVRGLSIAH VKSHLQMYRS KKLDNSKRGR NVFPSSVISL ADANRPRDHI SNLFYQRIFS  60
SQPLRMESGG PFSQRNDLEE YRCCHLLQRS QAQQSNDLKN FNSGRHQDWA FNQQMTSRIN  120
PIHDQGQARG LLHDLNLRKD GQPSTSHLFD VRDAITGNLN ARATHQFLWE RRWRSSDMAM  180
SQGTNTRGVI GSYDCIGRNS RLVPSNSTLK RNTSSTSFVD YCESKTNQIE PNSREPTVIS  240
DSIKPHFETP HWLKLQKNPA YQSKFKFEDI IEKSETPTAD MKKLIVARER DWTPNLQLSL  300
NNSHDGAGGR KGLEAGKVDN FLSLSLAHPM SENQVESFKV EKDAAKTEIQ FFPTESSK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010924608.2	0.0	uncharacterized protein LOC105047388
TrEMBL	A0A2H3Y4F5	0.0	A0A2H3Y4F5_PHODC; uncharacterized protein LOC103709531
STRING	XP_008793164.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	3e-08	G2-like family protein