PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010920204.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bZIP | ||||||||
Protein Properties | Length: 236aa MW: 25811.1 Da PI: 10.2496 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.4 | 1.2e-16 | 166 | 216 | 4 | 54 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++r +r++kNRe+A rsR+RK+a++ eLe +v+ L +eN +Lkk+leel+ XP_010920204.1 166 DRRYKRMIKNRESAARSRARKQAYTNELELEVAHLLEENAKLKKQLEELRL 216 5799*****************************************999975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-13 | 163 | 227 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.668 | 165 | 215 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.1E-15 | 166 | 215 | No hit | No description |
SuperFamily | SSF57959 | 3.81E-12 | 167 | 215 | No hit | No description |
Pfam | PF00170 | 1.8E-14 | 167 | 215 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.71E-26 | 167 | 221 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 170 | 185 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MEEVWKDINL TSLHHERRFA PLPEPHHHHH HHHHRAMILQ DFLSGPCFTV SRANAAVEDI 60 PLPPPPPLLP PTALSLSSGR ELQYLGGGGG GGGGSALMNG HSRSSSNSNG SRVHGQANNN 120 DNNARSGPFM SPSFSDAVIG PSSPAGFFSF CSKKRVMPEG PGIGGDRRYK RMIKNRESAA 180 RSRARKQAYT NELELEVAHL LEENAKLKKQ LEELRLAMDA QLPNRIALKR SSSAPF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010920204.3 | 1e-173 | protein FD | ||||
TrEMBL | A0A2H3X975 | 2e-66 | A0A2H3X975_PHODC; protein FD-like | ||||
STRING | XP_008780307.1 | 4e-67 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 4e-27 | bZIP family protein |