PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915503.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 530aa    MW: 59391.3 Da    PI: 6.4772
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915503.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.64.4e-31119172255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +Fv+a+e+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  XP_010915503.1 119 PRLRWTPDLHLSFVHAIERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 172
                     8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.812115175IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.7E-29115173IPR009057Homeodomain-like
SuperFamilySSF466895.91E-14117173IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-22119174IPR006447Myb domain, plants
PfamPF002492.4E-8120171IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MGGEKEMDQV VEICEDEEKS EKSERSVGSS RSPGLMKRPA PALDLNEVVA AEGSEEWEVE  60
RGDDEDDGGS TTEVAGGGSS SNNSSTNNCS NEDNNNSGGA EGSGERVPRV RPYIRSKMPR  120
LRWTPDLHLS FVHAIERLGG QERATPKLVL QMMNVRGLSI AHVKSHLQMY RSKKLDDSGQ  180
EKSGMSSVMS PMDTRPGRGD RLHEMFYQRS GAHQYFRMES GGFFPSRSVH DHDRLYSLLH  240
RLQLQRPLDL RSCNFGGHQQ WAFNQQAAAR ASTMKDHSPA SVLTQDMVYR KDEKPSTSHT  300
FDMRETTAGN GSMRPSHQFL EERRWLPGEM VAKQRLEGNR IGSLDLGVRS SSPLAKALPM  360
NPISTDSSLG WKGSSNYCYN DNIIHSNSHH PIVINDSLEP QFEKNPFRLE VLQKHPMNKP  420
MTTSEEILAR KETHIPEVKR MRMTMERDWN PNLHLSLSPN LVNDESTSKK DHEAEEEGDS  480
VLVLSLSPPI SMQQEETSKA EIQFLQRGSS HKAALGLSTL DLTMSIKALE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-17120174357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-17120174357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-17120174357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-17120174357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915503.10.0two-component response regulator ARR18 isoform X1
TrEMBLA0A2H3ZPJ10.0A0A2H3ZPJ1_PHODC; uncharacterized protein LOC103707382
STRINGXP_008790063.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-38G2-like family protein