PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915465.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family BES1
Protein Properties Length: 343aa    MW: 36545.5 Da    PI: 8.6574
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915465.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.69.7e-6621501148
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspess 93 
                     ++++r ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve DGttyrkg++p+  e+++++g+s s sp+ss
  XP_010915465.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVESDGTTYRKGCNPPpaERMDVVGCSVSPSPCSS 96 
                     5899***********************************************************************999***************** PP

          DUF822  94 lqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvss 148
                     +q        +sp++sy++sp+sssfpsp+s++ i++a++       +sl+p+l++ls+vss
  XP_010915465.1  97 YQ--------PSPRASYNPSPASSSFPSPASSSYITNANNaisvadgKSLIPWLKNLSSVSS 150
                     **........9999999999999999999999999998888999999**********99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.9E-703146IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVESDGTTY RKGCNPPPAE RMDVVGCSVS PSPCSSYQPS PRASYNPSPA SSSFPSPASS  120
SYITNANNAI SVADGKSLIP WLKNLSSVSS GSASKFPQHH LYMHGGSISA PVTPPLSSPT  180
ARTPRFKTDW DDQAARPSWA SASYTSIANS TPPSPGRQDI SDPAWLAGIH LPTGGPSSPT  240
FSLVSSNPFG FFKEVIAGGG SSRMLTPGQS GTCSPVMPGG SGHVDVQMSD GVSDEFAFGS  300
SSSNRHHPPA GLVRAWEGER IHEECGSDEL ELTLGSSRTR ADA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915465.10.0protein BZR1 homolog 3
SwissprotQ5Z9E51e-145BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A2H3ZQB91e-175A0A2H3ZQB9_PHODC; protein BZR1 homolog 3-like
STRINGXP_008790049.11e-176(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-96BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]